Pseudoliparis swirei (Mariana hadal snailfish): 130197229
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Entry
130197229 CDS
T09868
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
pswi03420
Nucleotide excision repair
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130197229 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
130197229 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130197229 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130197229 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130197229 (cdk7)
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130197229 (cdk7)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130197229 (cdk7)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
130197229 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
130197229 (cdk7)
Protein kinases [BR:
pswi01001
]
Serine/threonine kinases: CMGC group
CDK family
130197229 (cdk7)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130197229 (cdk7)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
130197229 (cdk7)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130197229 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
APH
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
130197229
NCBI-ProteinID:
XP_056275776
LinkDB
All DBs
Position
7:1389984..1397199
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKSRNKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHSNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQNWVLHRDLKPNNLLLDGNGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
NSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLYTFNPLTRTTATQALKMKYFSNRPG
PTPGPQLPRPNGPAEALREKEIVGLKRKIEGLETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacgttaaatccagaaacaaacgatacgagaaactggacttcctgggagag
ggtcagttcgccacagtgtacaaagccagggacaaaaccacagataccatcgtggccatt
aaaaagattaaggttggccacagaacggaggctaaagatggtattaataggaccgctctt
cgagagatcaaactcctgcaggaactacatcattcaaatatcatcgggctgctcgatgcc
ttcggacacaaatccaacatcagcctggtgtttgacttcatggagacggacctggaggtg
attatcaaagacaccagcctcgtcctgactccggccaacatcaaagcctacatcctcatg
accctccagggattagagtacatgcaccaaaactgggtcctacacagggatctgaagccc
aataatctgctgttagacggcaatggagtgttgaagttggctgattttggtttggccaaa
gcgttcggcagccccaacagagtctacacgcatcaagtggttaccaggtggtaccgctcc
cctgaactcctgtttggtgccaggatgtacggcgtgggcgtcgacatgtgggcggtggga
tgcatcctggcagagttactccttcggataccgttccttgctggagattcagatctggac
cagctgacgaagatcttcgaggctctcgggaccccgacagaagagacgtggcctgggatg
aatagtctacctgattatgtgtccttcaaaatatttcctggcacaccgctggaacatata
tttagtgcagctggagacgacttgctggagctgctccagggcctgtacaccttcaacccc
ctgacgaggaccacggccacacaggctctgaagatgaagtacttcagtaatcgacctggt
cccactccgggtccacagctcccccgacccaacggtcccgccgaggctctgagggagaag
gagatcgtcggcctcaagaggaaaatcgagggcctagagacaactgtgatgaagaagaag
ctcattttctga
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