Pseudoliparis swirei (Mariana hadal snailfish): 130197237
Help
Entry
130197237 CDS
T09868
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130197237 (si:ch211-225b11.1)
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130197237 (si:ch211-225b11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130197237
NCBI-ProteinID:
XP_056275785
LinkDB
All DBs
Position
7:complement(18145368..18159229)
Genome browser
AA seq
596 aa
AA seq
DB search
MEVEPKMPQGESDYALRPVDLKGADEGPVDAVAQRPTWSGRLDFILASVGYAVGLGNVWR
FPYLCYSSGGGAFVVPYLIMVLLCGIPLLFMEFAIGQYTRLGPVHALIKICPLLKGVGLA
TVVISFVFSTYYNVLMSWTLYYFFNSFGATLPWTSCNNTWNAVGNCSSGLPGNSTHLQSA
SQQFFDHSLLQKTSGIEEAGGIRWELFGYLILSWVIVYLCIFKGVKSTGKVVYFTAIFPY
FILFALLINNVQLPGAKNGILYFVTPVWGKLFEVKVWVNAAAQVFNSIGIAFGSMISMAS
YNKFNNNILRDALIVSVTNSFTSILAGFVIFSAIGYMAHIHNLPVENIATDGPGLVFVVY
PEVLSTMPFYQLWAPLFFFMLLCLGLDSQFATVEVAITFIKDEFGPQILRFLKREELLTL
VMCIVGFILGIPHVTKGGIFVFQLMDHHTAVVSLVFLAFFEVVAVCWVFGVPRLCLMVER
MQGKTPNIYFRVCWRLICPLLVLCILISSLVQYTPAHYGKYTYPAWAEVMGWGVSLVSIV
WIPLGAIHEISRHKGSLLQRLKTAMISTIDLDADDSLPEKQNLENPASENLFTSVT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgagccaaagatgccccaaggcgagagcgactatgctctgagacccgtggac
ctgaagggggccgacgagggaccagtggacgcggtggcgcagagacccacatggagcggg
cggctggacttcattctggcgtcggtgggctacgcggtgggcctgggcaacgtgtggagg
ttcccctacctgtgctacagcagcggaggaggtgcctttgtggtgccgtatctcatcatg
gttctcctgtgtggcattcctctgctcttcatggagtttgctattgggcagtacactcgc
ttagggccagtgcatgctctcatcaaaatatgtcccttgttgaaaggtgttggtttggcc
acagttgttatctcctttgtgttctccacgtactacaatgtgctcatgagctggacactt
tactatttcttcaactcgttcggagcgaccctcccctggacatcctgcaacaacacctgg
aatgctgtcggaaactgttccagtggtttgcccggcaacagcacccacctgcagtcggcc
agccaacagttctttgatcacagtctactgcagaaaaccagtggcattgaagaagctggt
ggcattcgctgggaactctttggctatctaatcttatcctgggtcatcgtgtatttatgc
atatttaaaggagtcaaatccactggcaaggtcgtgtatttcactgcgatattcccatac
ttcatcctgtttgccctgctcatcaacaatgtgcagcttcctggagcaaaaaatggtatc
ctctactttgtgacacctgtctggggaaaattgtttgaagtgaaggtctgggttaatgcc
gctgcccaggtgtttaactccattggaatagcgtttggctccatgatttcgatggctagt
tacaacaagttcaacaacaacattctccgggacgctttaattgtatcagttaccaactca
ttcacgagtatcctggctggctttgtgatcttctcagctattggctacatggctcatata
cataaccttccagtggaaaacatagcgacagatggtcctggtttggtgtttgttgtgtac
cctgaagtcctctccaccatgcctttctatcagctgtgggcacctctgttcttctttatg
ctgctgtgtctaggcctggacagtcagtttgccacagttgaagtggctataacattcata
aaagatgagtttggcccccaaattctgcgtttcctaaagagggaggagctgctgaccctg
gttatgtgcatcgttggctttatcctggggattcctcatgtcaccaagggaggcatattt
gtgttccagttgatggaccaccacaccgctgtggtgtcacttgtgttcctggctttcttt
gaagttgtcgctgtgtgctgggtctttggagtcccaagactctgcctaatggtcgagagg
atgcaaggaaaaactccaaacatctactttcgtgtgtgttggcggctgatctgcccacta
ttggtgctgtgtatactgatatccagtcttgtccagtacactcctgctcactatgggaag
tatacatacccagcatgggctgaagtgatgggctggggcgtctcactggtctccatagtg
tggatccccctcggagctattcacgagatctctaggcacaaaggctcacttctacagcga
cttaaaacggctatgatttccacaatcgacctggatgctgatgattctttgccggaaaaa
caaaacttggaaaacccggcatcggaaaacttgtttacttcagtgacatga
DBGET
integrated database retrieval system
