Pseudoliparis swirei (Mariana hadal snailfish): 130197269
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Entry
130197269 CDS
T09868
Symbol
krt1-c5
Name
(RefSeq) keratin, type 1, gene c5
KO
K07604
type I keratin, acidic
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130197269 (krt1-c5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130197269 (krt1-c5)
04147 Exosome [BR:
pswi04147
]
130197269 (krt1-c5)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
130197269 (krt1-c5)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130197269 (krt1-c5)
Exosomal proteins of other body fluids (saliva and urine)
130197269 (krt1-c5)
Exosomal proteins of colorectal cancer cells
130197269 (krt1-c5)
Exosomal proteins of melanoma cells
130197269 (krt1-c5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Rod_CreS
Tup_N
DUF6779
CEP63
Motif
Other DBs
NCBI-GeneID:
130197269
NCBI-ProteinID:
XP_056275821
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Position
7:complement(12335397..12343690)
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AA seq
427 aa
AA seq
DB search
MASTLSVRSYSVRQPSFSSMSVRDSGRSIRSKPSVSVGRTMSLSRSVSLGNGLNMLGHSL
SFNSLGGGRSDKEAMQGLNDRLANYLEKVRSLERSNVEMEVKIKQIMLEKAPKGHDIEGT
MAQAHAIGQEVRKKTLENARIMLEIDNAKLAADDFRVKWEAEAILCQSVERDCHALKRAK
SDHDQIIAALRGDLDSLKEELYFLKKNHDEEMNLMKSRVANEQVSVEVDVAHGPDLGAIM
AELRVQYEGIARNNKEESETWYLNKLEAVQSEVKGNTEGLRSAQSELSERRRFLQALEVE
LDSLRKQVCVLEGNLGETGHKYSMEMDRLQATLSHLEDELCQLRLDMQRNKTDYELLLRI
KQNLEMEIATYRRLLEGEETVKETPPPPKKEPDVRMRKIVKVVTQTMINGKVVDESSEVE
QIEECKK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccctctctgtgcgcagctactcggtgcgccagccctccttctccagcatg
tcggtcagggacagcggccgcagcatccgctccaagccctccgtctccgtgggaaggacg
atgtccctgtcccgctccgtctcattgggcaacggtctcaacatgctgggccacagcctc
tccttcaacagcctcggcggcgggaggagcgataaggaggccatgcagggcctgaacgac
cggctggccaactacctggagaaggtgcgctcgctggagaggtccaacgttgaaatggag
gtgaaaatcaagcagatcatgctggagaaggctccgaagggccacgacatcgaggggacg
atggcccaggcgcacgccatcgggcaggaggtgagaaagaagacgctggagaacgcccgc
atcatgctggagattgataacgccaagctggcggccgacgacttcagggtcaaatgggag
gccgaggccatcttgtgccagtcggtggagagggactgtcacgctctgaagagggcgaag
tccgaccacgaccaaatcatcgccgctctgcgaggagacctggacagcctgaaggaggag
ctctacttcctgaagaagaatcacgacgaggagatgaatttaatgaagtctcgcgtggcc
aacgagcaagtgagcgtcgaggtggatgtagctcacggtccggatctgggcgccatcatg
gctgagctcagggtccagtacgagggcatcgctcgcaataacaaggaggagtccgagacc
tggtacctcaacaagttggaagcagtgcagtcggaggtcaaaggaaacaccgagggattg
cgttctgcccaaagtgagctcagcgagagacgacgattcctgcaggctctggaggtcgaa
ctcgacagtctcaggaagcaggtgtgtgtgttggaggggaacctgggggaaacggggcac
aagtactccatggagatggaccgtctccaggccacgctgagccatctggaggacgagctg
tgtcagctccgcttggacatgcagcgcaacaagaccgactacgagctgctgctgcgcatc
aaacagaacctggagatggagatcgccacctacaggaggctgctggagggagaggagacg
gtgaaagaaacacctccacctccgaaaaaagaacccgatgtaaggatgaggaagatcgtc
aaagtcgtcacccagaccatgatcaacggcaaggtggtggacgagtccagcgaggtggag
cagatcgaggagtgcaagaaatga
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