Pseudoliparis swirei (Mariana hadal snailfish): 130197272
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Entry
130197272 CDS
T09868
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130197272 (snx13)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130197272 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
Motif
Other DBs
NCBI-GeneID:
130197272
NCBI-ProteinID:
XP_056275829
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All DBs
Position
1:11551622..11573178
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AA seq
978 aa
AA seq
DB search
MINVLHQRISSSQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTL
LYGKINSEKHLEKCEHSYLPPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITEELVDSFFEAEMEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLACGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPVELQAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMHGQQADGKKQSSATKGLLKAAALGVYEQYLSDKALPRVQVDEAPVTTL
GEKLQKDDPTPEIFDEIQKNVYDMMLHDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGEGESFNGSPTGSINLSLDDLSNSCHDENMHLHAFISDTADACLPGFWGATGMCNDHGK
TYALYAITVFRRSHDGSEDCWKTYRRYSDFHDFHMRIIEQFVNLTSILKLPGKRTFNNMD
RDFLEKRKRDLNTYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNP
LKSSMRNVSQAVKGLPDSLAEGMTKVSDNMGRMSERLGQDLKQSILKVPPLLPKSDIDPE
HCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINR
KIVDHVDYLTSPEQVADYVKKFRDSYWPNGILAETPPRRDKSIRMRTRIAAKTSLLGIMP
DELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVLLEGFLETMFPQYKFPELFVKLHSR
SPRIQKYGQKLKSSSLKR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgtccttcaccagcgaatttcttcatcacaacaaacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttccttgtcacctttggaccctttgcc
atattctacctggctttttatatattctgcttcattggagggggctttgcggtcactctg
ctttatggaaagatcaactcggagaaacacctggaaaagtgcgagcactcttacttgcca
cccacacaaattggtatactgaagacattggatgagatgaagctggagatgaagcccatc
aaaattgaccggagactaactggatccagtttcattgatgaaccactacaacaggtgatc
cagtttgctctgagagactacatccagtactggtactacactctgagcgaggatgagtcc
ttcttattggagatcagacagacgctgcagaatgccctcgtccagttctctacacggtcc
aaagaggtggactggcagccttactttaccactcgcctggtggacgactttgccacccat
ttgcgtgtctttaggaaagcccaggatcgcctcgctgaccgagaggacaagcagagagac
ataacggaggagctggtggactccttctttgaggccgagatggagatggaaagaaagatt
tgtcgagacgtagtatgcacttcacacaaagatgaagaaggttttcttcgggacttgtgc
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
tttctacgggaggtgctggcgtgtggtgtgctacttcctctgatcaaccagcttagcgac
ccggactacatcaaccagtttgtcatctggatgatccgggactccagctgtaactatgaa
gccttcatgaacatcctgaagctcacagacaagcctgttgagctgcaggctgtgaaggac
aaggtgctcgaggagctgcagtacctccgctctctggacactgccggagatgatatcaat
gtgatcaagaaccagattaacagtcttctgtttgtaaagaaggtgtgtgagacaaggatc
cagaggctacactctggcaaggaggtggacgccttgaagctggcagccaactttggcaag
ctgtgtgtcatcccactggatcacatcctcatccacaacatagccctgcagttcttcatg
gacttcatgcaggcagccggggcccaggcagagctcttcttctggctcacggtggagggc
tacagggtgacggcgcagcagcagctggaggccatgcatggccagcaggcagatggcaag
aagcagtccagcgccaccaaggggctgctgaaggccgctgcactgggtgtctacgagcaa
tacctctcagacaaggcgttgcccagggtgcaggtggacgaagcacccgtcacaacacta
ggggagaagctacagaaagacgaccccacgccagagatatttgatgaaatccagaaaaat
gtgtatgacatgatgctacatgatgagcgctactacccctccttcaagcagagtcctctc
tatgtccgcatgctagcagagttagacatgttgaaagagccgagctaccgggggtctgat
gacggcgagggagaatccttcaatggctctccgacaggaagcataaacctatctttagac
gacttgtccaactcctgccatgatgagaatatgcacctccatgccttcatctctgacaca
gctgacgcttgtctcccgggcttctggggtgctacagggatgtgcaacgaccacggaaag
acctacgcgctgtacgccatcaccgtgttcagacgcagccatgacggcagtgaggactgc
tggaagacctatcgccgctactctgacttccacgacttccatatgaggatcattgaacag
tttgtgaacttgacgtcgatcctcaagctgccagggaagaggacgttcaacaacatggac
agagacttcttggagaaaagaaaaagagacctcaatacgtacctacagttgctgctcaac
ccagagatggtgaaggcctgtccaacgctgattccttatgtatatgacttcctagagaac
aaggcctacagcaagggcaagggagagtttgcacgcaagatagacacatttgtaaatcct
ctgaagagttcgatgagaaatgtgtcccaagcggtgaaggggctgccggacagtctggct
gaaggcatgaccaaggtctctgacaacatgggccgcatgtcagaaagactgggtcaggac
ctcaaacagtccatcctcaaggtgcctccactcctcccaaagtctgacatcgaccctgaa
cactgtcgggtttctgctcagcttgatgacaacgtggatgacaacatcccgctgagggta
atgctgcttctgatggacgaagtatttgacctcaaggagaaaaaccagtggctgcgcagg
aacatcaagaacctgctgcagcagctgatccgagccacgtacggagacaccatcaacagg
aagattgtggaccatgtggactacttgacatcacctgagcaggttgcagactacgtcaag
aagttcagggattcctactggcccaacggtattctggcggagacgccgccccgtcgggat
aagagcatccgcatgaggacacgaatagctgccaagaccagtctgttgggcatcatgcca
gacgagctgaagcacatcatcggagcggacaccacgagaaaaggcatcctccgtgtcttc
gacatgtttcagtaccaacccatgaaccgtcggctggtctacgttctcctggagggcttc
ttggagacgatgttcccccagtacaaattccccgagctctttgtcaagttgcactcccgc
tcgccacgcatccaaaaatatggccagaaactcaaatcctcctccctcaagaggtga
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