Pseudoliparis swirei (Mariana hadal snailfish): 130197309
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Entry
130197309 CDS
T09868
Name
(RefSeq) protein crumbs homolog 2-like
KO
K16681
protein crumbs
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Laminin_G_2
Laminin_G_1
EGF_CA
Laminin_G_3
cEGF
EGF_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
130197309
NCBI-ProteinID:
XP_056275890
LinkDB
All DBs
Position
7:complement(30912243..30938818)
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AA seq
1464 aa
AA seq
DB search
MEFRKVWSRYRRTVLVPMMMVKLGLLCAASADACSSSPCSNNATCVDHLSDYACLCPRGP
VWYAGKNCDQLYDACITAPCANCTGEPGTDRFSCRCPDGLTGLNCTEDVDRCQSAPCEGV
RSNCVNAVHGYSCRCPPGLGGADCQRNVTTCSELACQNAATCVDVPDLGPRCRCAAGFQG
RSCEEDVDECRSQPCQNGAICQDGLDAYQCFCVPGFQGSHCDLDINECASRPCQHNGTCL
DEVDHYRCDCAAGFKGVNCEVEIDECKARPCQNGGACRDHVAAYTCECLAGFQGQDCQVN
VDECASGPCLNEGRCRDGVNSYQCDCEATGFVGDHCEEDIPECASDPCQHGATCLEGINR
YQCLCWPGYEGENCQLDVDECGPRPCDHGGQCFQRSDVLNYGTLPELRGDIFSYEEAAGF
ICRCLPGFTGDSCSVNVDECASAPCQHGGSCEDRVSSYRCVCPGGFTGVHCEADVNECDS
NPCNQGATCEDATNSYRCHCPEPEPGREPWGGPDCDVRLAGCRQHRCRLGAGCVPVLTGD
GEHGYTCLCPPGWTGNRCNTSTTFSFNSEGYVHMRLPLSENGTRRETEVQDRDGLHMQLR
FRSTLDHMVLYYRGTAEHFVSLELVGGSLHARVKSGKVLQVTYPALVNDGEWYQATVTMD
VRLVLVVKGPGCEEYCSVRDEGNNHLVFLQPGSFQQLYVGGAPREYLPQTSSGRGFVGCM
EDLRVDHKPLLPQDLIREDHQGLQVGCSKQDWCVDDPCGQRGRCVDLWVRPGCQCHRPYH
GERCEEEYPSWTFGHENTTSYVGFNITESHGDNFTLSFLLRSLKHSGLLLQLRREGKAYL
TVYLKEGTVAVYSPHTTLLLEAQSVTDGNNNLVAIKVRYGHVVFPKAGNHRALGNVSVEA
GDVAYVGGLPAGERTDAWGGNVKGCLQDIRLDHRHLTTEDHLEGGEVYQAGTEENVLRGC
QSDDTCKGQPCSNGGRCRVTWNDFQCDCSRKYSGRLCETRLWCVASPCPEGVRCVDLQDG
YECLTEAIFQDNALRYVANGSLLSPVTSVTLDIRTRDRDGVLLRAVGRAEFFYLGLLNSS
LLVKLDSGASGEPLAFTSDRAVADGAWHRVRLAMADPTRPASRWRLAIDGQSVGGSFGVG
GNLNFLNDTQIHLAEKYTGCIGEVRVGGVYLPLTHVPEAPQTSQFSRLGGHEPIIGCQGA
PMCDAQPCLNRGACQDQFNQFNCSCAAGWEGALCEMEVDECSSGPCVYGTCRDLLADYQC
DCQPGYAGRDCEEQLDDCVEFPCENGGGCVEALEAHSCSCPTGYVGTRCQWRFPPVACDA
QTECRHGGVCIGGDSGGNCTCKLGYTGARCETEIDECASGPCLHGATCLDRLNHFQCVCV
PGFSGSSCESHKEERKEGIPWLVVTIPLITLCALLAILVVFCLVLTARKKRQSEGTYSPS
SQEVAGARLEMGSVLKVPPEERLI
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaggaaagtctggtccaggtaccggaggacggtgctggtccccatgatgatg
gtcaaactgggcctcctgtgcgccgcctcagcagacgcctgctcgtcgtctccctgcagc
aacaacgctacctgtgtggaccacctgagcgactacgcctgcctctgccccagaggaccc
gtctggtacgcgggcaagaactgcgaccagctgtacgacgcctgcatcacggcgccgtgc
gccaactgcaccggcgagccggggacggaccggttcagctgccgctgcccggacggcctc
acggggctcaactgcaccgaggacgtcgaccggtgccagagcgccccatgtgagggggtc
cgctccaactgcgtcaacgccgtccacggatactcctgccgctgccccccggggctgggg
ggggccgactgtcagaggaacgtcaccacctgttcggagctggcatgccagaacgccgcc
acctgcgtggacgtccccgacctggggccgcggtgccggtgtgccgccgggttccagggc
aggagctgcgaggaggacgtggacgagtgccgctcgcagccctgtcagaacggagccatc
tgtcaagacgggctggacgcctaccagtgcttctgcgtgccggggttccaaggctcccac
tgcgacctggacatcaacgagtgcgcctccagaccctgtcagcacaacggcacctgtctg
gatgaggtggaccactaccggtgtgactgcgctgcaggcttcaaaggggttaattgcgag
gtggagatcgacgagtgcaaggcgcgtccctgccagaacggcggcgcctgccgagaccac
gtcgccgcgtacacctgcgagtgcctggccggcttccagggccaggactgccaggtcaac
gtcgacgaatgtgccagcggcccctgtttgaatgaaggccggtgcagagacggggtcaac
agctaccagtgtgactgcgaggccaccggcttcgtgggcgaccactgtgaggaggatatc
cctgaatgtgcctccgacccctgccagcatggagccacctgcctggaggggatcaaccgg
taccagtgcctctgctggccaggttacgagggagagaactgccagctggacgtggatgag
tgtggcccgcggccctgtgaccacggcggtcagtgcttccagcgctcggacgtcctgaac
tacgggacgctgcccgaactccggggagacatcttcagctacgaagaggccgccggcttc
atctgccgctgtctgccaggattcaccggagacagctgctccgtcaacgtggacgagtgt
gcgtctgctccgtgtcagcacggcggcagctgtgaggaccgggtcagctcttatcggtgt
gtgtgtccaggcggcttcacaggcgttcactgcgaggcggacgtgaacgagtgcgacagc
aatccctgcaatcaaggcgccacgtgcgaggacgctaccaactcctacaggtgccactgc
cccgagccggagccgggccgggagccctggggcgggccggactgcgacgtccgcctggcg
ggctgccggcagcaccggtgtcgacttggcgccggttgcgtccccgtgctgacgggcgac
ggcgagcacggttacacctgcctgtgtcctccgggctggaccggcaaccgctgcaacacc
tccaccaccttctccttcaactccgagggctacgtccacatgcggctgcccctatccgag
aacgggacgcgacgggaaaccgaggtccaggaccgcgacgggctccacatgcagctccgg
ttccggagcactctggaccacatggttctgtactaccggggcaccgcggagcacttcgtc
tccctggaactggtcggaggctcccttcatgccagggtgaagtcagggaaggtcctgcag
gtcacttaccccgccctagtcaacgacggtgaatggtaccaggccacggtgaccatggat
gtgaggctggttctggtggtaaaaggacccggctgtgaggaatactgctctgtgagggac
gagggcaacaaccatctggtcttcctccagcccggctcctttcaacagctgtatgtcgga
ggggcaccgcgggagtatttaccccagacgtccagcggaagggggttcgtcggctgcatg
gaggaccttcgagtggaccacaagccgctgctcccgcaggacctcatccgggaggatcac
cagggcctgcaagtaggctgcagtaaacaggattggtgtgtagacgacccgtgtgggcag
cgcggccggtgcgtggacctgtgggttcgtcccggctgtcagtgtcaccggccctaccac
ggagagcgctgtgaggaagagtacccgtcctggaccttcggtcacgagaacaccaccagc
tacgtcggcttcaacatcaccgagagtcacggggacaacttcaccctctccttcttactg
cgctccctcaaacacagcggcctgctcctgcagctgcgccgcgaggggaaggcctacctg
acggtgtacctgaaggagggcaccgtggccgtctacagccctcacaccaccctgctgttg
gaggcgcagtcggtcaccgacggcaacaacaacctggtggctataaaggtgcggtacggc
cacgtggtcttccccaaagcggggaaccatcgcgcgttgggcaacgtgagcgtggaggcg
ggggatgtggcctacgtgggggggctgcctgcaggcgagaggaccgacgcctggggggga
aacgtcaagggctgcctgcaggacatccggctggaccaccggcacctgaccacggaggac
catctggaagggggggaggtgtaccaggccggcaccgaggagaacgtgctgcgtggatgc
cagagtgatgacacgtgcaagggtcagccctgttccaacggcggacggtgtcgggttacc
tggaacgacttccagtgcgactgctccaggaaatactctggccggctgtgtgagacccgt
ctgtggtgcgtggccagcccgtgtcctgaaggcgtgcgctgcgtggacctgcaggacggc
tacgagtgtctaactgaagccatcttccaggacaacgctctccggtacgtggccaacggc
tcgctgctgagcccggtcaccagcgtcacgctggacatccggactcgagaccgggacggg
gtcttgctgcgcgccgtcggccgagccgagttcttctacctcggcctgctcaactcctcc
ctgctggtcaagctggacagcggggcgagcggcgagccgctggccttcaccagcgaccga
gccgtcgcagacggagcctggcaccgcgtccggctggccatggcggatcccacgcggccg
gcgtcccgctggcgcctcgccatcgacgggcagagcgtcggcggcagcttcggcgtcgga
ggaaacctgaacttcctcaacgacacccaaatccatctggcggagaaatacactggatgc
ataggggaggtgagggtgggcggagtctacctgccactcacacatgtcccagaagcccct
cagacgagccagttctccaggctggggggccacgagccaatcataggctgccaaggagcg
ccgatgtgcgatgcccagccctgcctcaaccggggggcgtgccaggaccagttcaaccag
tttaactgcagctgcgctgccggatgggagggggcactgtgtgagatggaggtggacgag
tgttcttcagggccctgcgtctacggcacatgtagagaccttctggcagactaccagtgt
gactgccagcccggatacgcggggagagactgcgaggagcagctggacgactgtgtggag
ttcccctgtgagaacggaggcggctgtgtggaggcgctggaggcccacagctgctcatgc
cccaccggctacgtcggcacacgctgccagtggcgtttccctccggtggcgtgcgatgcg
cagacagagtgtcgtcatggaggcgtctgcatcggtggagactctggaggcaactgcacc
tgcaagctgggatacaccggtgccaggtgtgagacagaaatagacgagtgtgcgtccggc
ccttgtctccacggggccacctgtctggaccgactcaaccacttccagtgtgtgtgtgtg
ccgggtttcagcgggtcatcgtgtgagagccacaaagaggagcgtaaggagggcatcccc
tggctggtggtgaccatccccctcatcaccctgtgtgcgctgctggccatcctggtggtg
ttctgcctggtcttgacagcccggaagaagcgccagtcggagggcacctacagccccagc
tctcaggaggtggccggggccaggctggagatgggcagcgtcctcaaggtgccccccgag
gagaggctgatctga
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