Pseudoliparis swirei (Mariana hadal snailfish): 130197327
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Entry
130197327 CDS
T09868
Symbol
ccnh
Name
(RefSeq) cyclin-H isoform X1
KO
K06634
cyclin H
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
pswi03420
Nucleotide excision repair
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130197327 (ccnh)
09124 Replication and repair
03420 Nucleotide excision repair
130197327 (ccnh)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130197327 (ccnh)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130197327 (ccnh)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130197327 (ccnh)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130197327 (ccnh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
Gp58
Motif
Other DBs
NCBI-GeneID:
130197327
NCBI-ProteinID:
XP_056275928
LinkDB
All DBs
Position
7:3726545..3731330
Genome browser
AA seq
345 aa
AA seq
DB search
MFHKSSQGKHWIFRSEDDVEQKRLTANQKFRSVTLESGKPAVSESMFLERHEEDVLFRHY
EKRMVDFCNAFKPVMPKSVVGTAIMYFRRFYLNNSIMEYHPRIIMLTCAYLSCKVDEFNV
SSTQFVGNLLQETPAGQEMVLEQILEFELLLIQQLNFHLVVHTPYRPMEGLLIDLKTRYP
TLENPESLRKNADEFLTQAAMTDAGLLFPPSQIALTAILNSASRAGLSMESYLNECLRLK
EDKETLSKMYDSMRQMKTLLRKYELPNAEEVNAYKKKLERIHAEFSISSNKRKRGYEEDG
HVSKEPRLIEEVRPYLHDMLTVKQSGTTYFHSRFSLQEWTDEDLV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgttccacaaaagttcacagggaaaacactggatttttcgaagtgaagacgatgttgag
cagaagagattaacggccaaccagaaattccgcagcgttacacttgagagcggaaagccc
gcggtgagcgagtccatgttcctggagcgtcacgaggaggacgttttgttccgacactac
gagaagaggatggtggacttctgcaatgccttcaagcccgtcatgcccaagtccgtcgtg
ggtacggccatcatgtacttcagaagattctacctgaacaactccattatggagtaccac
ccgaggattatcatgctgacttgtgcctacctgtcctgtaaggtggatgagttcaacgtt
tccagcacccagtttgtgggcaaccttctgcaggagactccagcagggcaggaaatggtt
ctggaacaaatcctggagtttgagctgctgctgattcaacaactcaactttcacctggtg
gtccacaccccctacaggccgatggagggcttgcttattgacctcaagacgaggtacccc
accttggagaacccagagtcactgaggaagaatgcagacgagttcctgacgcaggcggcc
atgacggacgcagggctgctgtttcccccctctcagatcgctctcacggctattctgaac
agcgcctcgagagctggtctcagcatggagagctacctgaatgaatgtctgcggctgaaa
gaggacaaagagactctctccaagatgtacgactctatgagacaaatgaaaaccctcctc
aggaagtatgaacttcccaacgcggaggaggtaaatgcttacaagaagaagttggagagg
attcatgcggaattttccatttcaagcaacaaacgaaagagaggttatgaagaggatggt
catgtatcaaaagaacctcgtttaatagaagaggtgagaccatatttacatgatatgctg
acagttaagcaatctggaactacatattttcactctcgtttctcgttgcaggaatggacc
gatgaagacctggtatga
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