Pseudoliparis swirei (Mariana hadal snailfish): 130197333
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Entry
130197333 CDS
T09868
Symbol
si:dkey-13n15.2
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130197333 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130197333 (si:dkey-13n15.2)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130197333 (si:dkey-13n15.2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
130197333
NCBI-ProteinID:
XP_056275939
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All DBs
Position
7:17217424..17227547
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AA seq
970 aa
AA seq
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MMDVPAANQSHTPSQPWAGQNGWSPASPLGPPCDPLAGFQQLSLSSPSDQRPRLDHQGGD
LATCPPSGDTRFTLHPIDADRRARGPAEPPRSLPLAAEGLQPMPFYSPHSPHPGTAPLFQ
PPYTHQGPPDGPRRPYQTHLPISSPSLGAPESSGGFTHRLAPPTSPVSQRTNSGGTINEF
VPNATPQDGNATPQSPSSESRYGLDPQLLPSVVEVIAEDAAEWGGRVFVSEPFSRLPPLA
TTSCPVEDRGSASPLAIRSASYCIPCDGPTALLSRLPLGALLTPLAQTQVGEGALPVCNE
PECVMGCGGCGASMCPAMGWQDCGQRFHCPFCGRLSEVPWQHYQPTRGEEGVRVDKDKRP
ELSRGSYEILHSQRAXPAALLLAVDVSASAVRGGHLEFATRQILSLLASLTREGGDAPSD
VRVGLMTYDGRIHLYDLSPALSRPRMLVIAETEELQLPMREGLLVPLRECKDSIDSVLRL
IPQLSPERGEASGVAMELPVKAGLAVLQALSCPGKLLIFHSAPLIETGHADSSSGFFGAN
KPKSIFQPSELALSLAKDCVRQGCGVHLFVFAQQDVGGAWPGHIPYLTGGALYTYSHLQG
ELDRERFISDLKSAVETDTAYKAELRIHVSKDMRVSGCYGLYVPESGPSRVALATLDPRT
TLAVELAHTRALDETTGVAIQTVLSYSTWTGDRRTRVHTLTLRCSPRLQDTFRQYQAQTL
LAFYCKRIYCSVLERPLQELREELQTEVTEAVASYRKHCCSTSVSAGQLVLPQYLRSLPV
YINSLRKSEVLLPGLRSSVHRRLQLRCQLLRMDTAGTCSHFYPLLLPLPPSVDRSGSPDP
AAALRCCAASLEPGRLYLVHSPLALLLWVGSQVPECTLLELFNGRCFSSLPSGEVKLPLL
DTPLAAGVRSLVRTLTSEAPSARQLLVVKEGDAHQEVLQHHLVEDKSPNGGASYADFLYH
LHVNSVRILQ
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtccccgcagccaatcagagccatacaccctctcagccctgggcgggccag
aacggctggtcccccgcgtcacctctggggcccccctgcgaccccctggccggcttccag
cagctcagcctgagctctccctctgaccagaggccccgcctcgaccaccagggcggcgac
ctcgccacctgcccaccctcgggcgacactcgctttactctccatcccatcgatgccgac
cggagggcccgcggtccagccgagcccccacgctccctccctctcgcggcggaaggcctc
cagccgatgccattttactcccctcacagccctcacccagggacagcccccctcttccag
cccccgtacacgcaccagggtccaccggacgggcctcggcgcccttaccaaacacacctg
cccatcagctctccatcactgggtgcacctgagtcctcggggggcttcacacaccgtctg
gccccgcccacgtctcccgtctcacagcggaccaactcaggaggaaccatcaatgagttt
gttcccaacgccacgccacaggacgggaacgccacgccacagtctcccagctctgagtcc
cggtacggcctggacccccaactgctgcccagcgtcgtggaggtgatcgctgaggacgcg
gcagagtgggggggcagggtcttcgtttcagagcccttttcccgtcttcctcctctggca
acgacttcctgtcccgtagaggaccgaggcagcgccagtcctctcgccatccgctcggcc
tcgtactgcattccctgtgacggaccgaccgccctcctcagccgcctgccactaggggcg
ctgctcacccctctggcacagacacaggtgggagagggggcgctgccggtgtgcaacgag
ccagaatgcgtgatgggctgcggtgggtgcggcgcctccatgtgtccggcgatgggctgg
caggactgtggtcagaggttccactgcccgttctgtgggcgcctcagtgaagtgccgtgg
caacactaccagcccaccagaggggaggagggcgtccgggtggataaagacaagaggcct
gaactgagcagggggtcgtacgagatcctccactctcagagggcttagcctgccgctctg
ctgctcgccgtagacgtgtccgcctcagcggtgagaggaggacatttggagtttgcgacg
cgtcagatcctgtctctgctcgcctccctgacgagggagggcggcgacgccccgtcggac
gtccgcgtcggtttgatgacgtacgatggcaggatccacctgtacgacctgagcccggcg
ctgtcccgcccacgcatgctggtcatcgcggagacggaggagctgcagcttcctatgagg
gaggggctcctggtgcccctgagagaatgcaaagacagtatagacagtgtgttgcggctt
attcctcagttgagtccagagcgtggcgaggcgagtggcgttgccatggagctgcctgtc
aaagccgggctcgccgtgctgcaggccctgagttgtccgggcaagctgctgatcttccac
tccgcccctctgatagagacgggacacgcagactcgtcctctgggttttttggcgccaac
aaaccaaagtctatcttccagccatcggagctcgccctctcattggccaaggactgtgtc
cgtcagggctgcggcgttcatctgtttgtcttcgcccagcaagacgtgggcggggcttgg
ccaggccacattccatatctaacaggcggcgctctgtacacctacagccacctccagggg
gagctggaccgagagcgtttcatctccgatctgaagagcgctgtggagacggacacggcc
tacaaggctgagctcaggattcatgtcagcaaagacatgcgcgtgtccggctgctacggg
ctctacgtgcccgagtccggccccagccgggtcgccctggcgacccttgacccgaggacg
acgctggccgtggagctggcccacaccagagctctggacgagaccacaggtgtggccata
cagactgtcctgtcctacagcacctggaccggcgacaggaggactcgggtccacaccctg
accctgcggtgctctcctcgcctgcaggacacgttccggcagtaccaggcccaaacacta
ctcgccttctactgcaaaagaatttactgctcagtgctggagcgcccccttcaggagctg
agggaggaactgcagacggaggtgacggaggcggtcgcgtcctaccgcaaacactgctgc
tccacctctgtgtctgctggacagctggtgctccctcagtacctgcgttcgctccccgtc
tacatcaacagtctgaggaagagtgaagttctgctgccgggcctccgcagctcggtccac
cggcggctgcagctgcgctgccagctgctccgcatggacaccgccggcacctgcagccac
ttctaccccctgctgctgccgctgccgccctcggtggaccgctccggctccccagacccg
gcggcggcgctgcgctgctgcgcggccagcctggagcccggccgtctgtacctggtgcac
tcgcccctcgccctgctgctctgggtgggctcccaagtcccagaatgcaccctgttggag
ctcttcaatggccgctgcttctcctcgctgccctcgggagaggtgaagctgccgctcctc
gacaccccgctggctgccggcgtccggtccctcgtccgcacgctgacctccgaggcaccg
agcgcccgccagctgctggtggtgaaagagggcgatgcccaccaggaggtgctgcagcac
cacctggtggaggacaagagtcccaacggaggagcgtcctatgccgacttcctgtaccac
ctccacgtcaactcagtccggatcctgcagtga
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