Pseudoliparis swirei (Mariana hadal snailfish): 130197355
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Entry
130197355 CDS
T09868
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130197355 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2_C
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
130197355
NCBI-ProteinID:
XP_056275977
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All DBs
Position
1:complement(11919459..11928944)
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AA seq
442 aa
AA seq
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MRGTMSVAAVALRLAAVVTILSRAHADRNVYPSAGVLFVHVLEREHFKAEFPPYPKSGDA
STDPITFNTNLKGYPDRPGWLRYIQRTQRSDGVLYGSPTATYAGKPSVIEITAYNRRTFE
TARHNLVINIMGTKEFPLPYQAEFYIGNMNVEEMLASEVLGDFLGAVKNIWQPERLNAIN
ITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVESPHNQLRCSQEMEPSISCDK
KFRAQFHIDWCKISLVDIKKVVPVYITRPDPGNGILPEFGEYNPPSETLVGRNYFSDFLI
TLAVPSAVALVLFVILGYTMCCRREGVEKRNMQTPDIQLVHHGSIQKSSKELRIMSKNRE
ISWPLSTLPVFNPVSGEVVPPLHPDNYETTSMPLMQTQTNLQNQITIPQQRPSGDSYVMS
TFRRLEVNGIPEERKVAEALDL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcaccatgtccgttgcggcggtcgcgctgcggctcgctgcggtggtcacaatc
ttgtcaagagcacatgcggatcgtaacgtctacccatcagcgggagtgctgttcgtccat
gttctggagagagagcacttcaaagcagagtttcctccctaccccaaatccggtgatgcc
agcactgacccgatcactttcaacaccaacctgaagggctaccccgacaggccaggctgg
ctgcgctacatccagaggacccagcgcagcgacggagtgctctacggatcccccaccgcg
acgtatgccggcaagccctccgtcatcgagattacggcctataacagacgcactttcgag
actgcacggcacaacttggtcataaacatcatgggcaccaaagagttccctctgccctac
caggcggagttttacatcgggaacatgaacgtggaagagatgctggccagcgaggtgctg
ggcgacttcctgggagcggtgaagaacatatggcagcctgagcgcctcaacgccataaac
atcacctcggcgctggaccgcggcggccgcgtgcccctgcccatcaacgacctcaaggaa
ggggtgtatgtgatggttggcgctgatgttcccttctcgtcgtgcctgcgagaggtggaa
agcccacataaccagctgcgctgcagtcaggaaatggagccctccatcagctgcgacaag
aagttcagagctcagtttcacatcgattggtgcaagatctctctggttgacataaaaaaa
gtggtcccggtgtacattacccgtcccgacccgggaaacgggatcctgcctgaatttggg
gaatacaaccccccctccgagactctggtgggccggaactacttttcggatttcctcatc
acgctggcggttccctccgctgtggcactggtcctcttcgtcatcctcggctacactatg
tgctgccgacgggaaggggtggaaaaaagaaacatgcaaacaccagacatccagctggtt
caccacggctccatccagaagtccagcaaggagctgcggatcatgtccaagaaccgggag
atctcctggcccctctccaccctgcccgtcttcaaccccgtcagcggcgaggtggtgccg
ccccttcacccagacaactacgagaccaccagcatgcccctcatgcagacacagacgaat
ctacaaaaccagataacgataccacagcaacggccatcaggagatagttatgtcatgtca
acatttcggaggctggaggtaaatggtattcctgaggagaggaaggtggccgaagcactg
gatttgtga
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