Pseudoliparis swirei (Mariana hadal snailfish): 130197362
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Entry
130197362 CDS
T09868
Symbol
pdzd2
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130197362 (pdzd2)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
130197362 (pdzd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130197362
NCBI-ProteinID:
XP_056275983
LinkDB
All DBs
Position
7:complement(31356017..31404235)
Genome browser
AA seq
2208 aa
AA seq
DB search
MPITQDNALSILSLLENWRGAQRSQQDHNLNRDRSSCKQVHQDSQQNGEVGRLCSSSGVR
AEDVSLCLPAILKLTEYIKFNFLEGEAASPGSPSSSVREGPDVEVHAVSLCKDPGDAAEF
GLSFGNIPIFGDPDGRKKGGPRRRRDQGPIGDVGCIWVTEVRKRSPAAHCGAIKLRDELL
SLNGQLMVGVDVGGASYLADQCWSGGRIYLIMLRRVKRQAPPPPCNANAAAGGRAEDPPR
CGAASAPPANGKRTRKVGVISRSSSNRDSGLKSSHHGCNGSAPAAEGAPPGGGGPSGGGG
PPRGGGLPGGGGPSGGGGLPGGGGPSGGGGPSGGGGLPGGGGPGGVHSPAASPLGRTAPQ
RLRGATLPTRCHSQLLECSMESFSSESSSLPREGSYIWKMHMVKGDEGLGIQITGGRGSK
RSPRGVVIAHVEKAGAIHRDGRLQAGDELLMVSGFSLLGLTHQEAVATLRSSCGLVQLVV
ASREESDVGFERFPSTSLPDLVSTCKSPPPQTSACCPHLLTDLEKPDAPRPQARSTRSDL
YGRNMASAPLALSDGVPVPSGGGGRLESVGEDDELLVEGGGGEAAAWKPPPGRRKHSLPQ
QLDATRVRQDLVMKKSARSLSTVQVESPWRLAQPSIVSSIVLMKGPGLGFSIVGGQDSAR
GQMGIFVKTIFLHGAAAADGRLKEGDEVLEVNGESLQGLTHQQAIQTFKQLKKGVVTLTI
RTRLRSPSLTPTLLSRSNSPNSNTSGGTPVASGGEEAEGHRGPPGPGPKDCIIMEVTLNK
EPSVGLGIGVCCLTLENSAPGIYIHSLALGSVAKMDSRLSRGDQILEVDSVSLRHAALGE
AYAILRECGPGPVSLIISRHPNPKVSEQEMDQVIARSTLRDKTSKPRPPPHPQGPSCKTH
PAPKDRQGDGSPALSWTMKRFLEPASRQGSLSSETELSQYFSSQSVLMGANSEAALPQRS
CSASMDDSSPRPPEVPIASQPRTPVHRVEPVAASSPASLRSPLLRQRRLRCLEDELSDED
EDGGPTKTDPLVFKRASGDPRRDSAVASAPPPLCREGLVTLRRTEGESFGLDLEVTSPPL
KVVVVGLKPGGAAEREAAGSLSPGDQLLRIGDTSVRSSTYRHICELMHHLPRTLTLEVKR
PLSAVDRLSSLMMSSGSSDGAPTLNPPTSVQGTSDEGQVTGANSENSNHTTRTDVHVAVT
AIEGVLSEVSVRSARRTPPPCNSLSPEPAACHPSPCENIQAPVESGPLGSSSSEAGNRNG
AVPPVETLSSAVFYGPHAGSKCMCPKGEDSDSSAGRRVPVNTTAGSLHEEAVEVCLCDGR
RPAARDISPSSQSANGAPSSQHDSSQNTELEPTSPLSADVLPANNEDSVTTSRDSQPSPP
LGVSAPVQQCHTSPVDSSERHPDGAMEPCDGGPSPPGTHRVTKGTTTTHVHADSLLSSTS
WKNLNTQTLHSAPVESEASASRIHQLDTRVSASLTSKEKALECRTNLNSHAISVLKKSSG
LKPPGDRDYPVWSSSFKLQVETQIRLNANVPKLKGLAIKSRNTAQEEPTGRESPVSLNQS
PKYPSTPTTSSSLKDKTPCLDLPKVSERRPAEAGPSGTSQTEIQFSSKPPAKAHTTTQRT
FIEVRLSSLYGSSPQRETVTPEDSQPAQRGTDAGPAPTGSPANSTAERTKGKEDSSPTNG
SKPRTVVETSEALKPSMKTMDRRSLPTDTALSSVRHKIKSFENLANFDKPVAKSSDIHSY
ALAYRASLHQRIAGYMGVVNSIDCRSRQRSFTSYVENLMPTTRCSPLLTTSPSSITLTNL
ELPRSSCSAVPPAEGLRASDGAGPLTPQVLRRKHGRLPLGSLRQLRAISMPDLDQLCTED
FGSDRGAAVETTERGGDAVLQTATEAQSSPAPADRTNVDVTRDSGGDVGSTEDPPQGTPE
TPGQPPGWAISFKELASSPGSQSALLSLLTSPGLQSYASALLQEAQALSQVNGNTHLVVL
SKEEGSGLGFSVAGGVDLEQKAITVHRVFSKGPASLEGRIQRGDSVLSVNGTSLGGKTHS
EVFSCLHQARLSTQALVVIWRDEDGELDEKSSGAGTGGSPVPPPSLMYDVQPQQPHDAPL
CGGGGPDGASAVELHKSSAGLGFSLEGGKASSQGGXPLTVQRIFKGGATELSGLMEVGDQ
VVSINGRSLEGLLHHDAWKVLKATEEGPNQLLVRRARPLPVKNQALES
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcaggacaacgccctcagcatcctctccctgctggagaactggcgcggg
gctcagaggtcccagcaggaccacaacctgaatcgagatcgctccagctgcaagcaggtg
catcaggactcccagcagaatggggaggtcggccggctgtgcagcagcagcggcgtccgg
gcggaggacgtgtctctgtgtctgccggccatcctcaagctgacggagtacatcaagttc
aacttcctggagggcgaggcggcttcgcccggcagcccctcctcctccgtcagggagggg
ccggacgtggaggtccacgccgtgtcgctctgcaaagacccgggcgacgccgccgagttc
ggcctcagcttcggcaacatccccattttcggggaccccgacgggagaaagaaggggggc
ccgaggaggaggagggaccagggccccatcggggacgtgggctgcatctgggtgacggag
gtgaggaagaggagcccggcggcccactgcggcgccatcaaactccgggatgagctgctg
tcactcaacgggcagctgatggtgggagtcgatgtgggtggagccagttacctggccgac
cagtgctggagcggaggccgcatctacctgatcatgctgcggcgagtcaagcgccaggct
ccgcccccgccctgcaacgccaacgccgccgctggaggccgcgccgaagacccgccgcgg
tgcggcgccgcctccgcccccccggccaacggcaagcgcacgcggaaggttggcgtgata
tcgcggtcgtcctccaatcgggactctggattaaagagctcgcaccacggctgcaacggc
tccgcccccgccgccgagggcgctcctcctggagggggcggtccttctggagggggcggt
cctcctagagggggcggtcttcctggagggggtggtccttctggagggggcggtcttcct
ggagggggcggtccttctggagggggcggtccttctggagggggcggtcttcctggaggg
ggcggtccgggtggcgtccacagcccggccgcctcccccctggggaggacggcgccccag
cggctccgcggcgccacgctgccgacccgatgtcacagccagctgctggaatgcagcatg
gaatccttcagcagtgaatcttcaagcctgcccagagagggcagctacatctggaagatg
cacatggtgaagggcgacgaggggctgggcatccagatcacgggggggcggggctccaag
cgctcgccccgcggcgtcgtcatcgcccacgtggagaaggcgggcgccattcacagggac
ggccgcctgcaggccggagacgagctgctgatggtcagcggtttctctctgctgggcctc
acgcaccaggaggccgtggccacgctgcgctcctcctgtgggctggtgcagctggtggtg
gccagcagggaggagtctgacgtgggttttgagcgcttcccgtccaccagcctgccggac
ctggtcagcacctgcaagtccccccccccccagacctctgcctgctgcccccacctgttg
actgacctggagaagccagatgccccccggcctcaggctcggtccacacgcagtgacctc
tacgggaggaacatggcgtccgctcccctggcgctctctgacggtgtgcctgtcccctca
ggggggggcggccgcctggagtcggtgggcgaggacgacgagctgctggtggagggcggc
ggcggcgaggcggcggcgtggaagcctccgcccggacgccgcaagcactccttacctcag
cagctggacgccaccagagtgagacaggacctcgtcatgaagaagtcggcccgctcgctg
agcaccgttcaagtggagtctccatggcgactggcgcagccgtccattgtctccagcatc
gtgctgatgaaaggcccgggtctaggattcagtatcgttggggggcaggactcggcccgc
ggtcagatggggatctttgtcaaaaccatcttccttcacggagctgcggcggccgacggg
cgcctgaaggaaggggacgaggtcctggaggtcaacggggagtccctccaaggactcacg
caccagcaggccatccagaccttcaagcagctgaagaaaggcgtggtgacgctgaccatc
cggacccggctgcgcagccccagcctgacccccaccctgctgagccgctccaactcgccc
aactccaacaccagcggggggacccccgtcgcctccgggggggaggaggccgaggggcac
aggggcccccccggtcctggtcccaaggactgcatcatcatggaggtcacactcaataaa
gagcccagtgttggtctggggatcggggtttgctgtctgaccctggagaactctgctcct
ggcatctacatccacagcctggcgctgggctctgtggccaagatggacagcaggcttagt
cgtggggatcagatcctggaggtggactcggtcagtctccgtcacgccgctctcggcgag
gcctacgccatcctcagggaatgtggccctggaccggtcagcctcatcatcagcaggcac
cccaaccccaaggtctcggagcaggagatggaccaggtcatagctcgatccacactgcgc
gacaaaaccagcaaaccccgacctccaccccacccccaaggtccgtcctgtaagacccac
ccagcgccgaaggaccggcagggagacgggtccccggccctcagctggaccatgaagagg
ttcctggagcccgccagtcggcagggctccctgagctcagagacggagttgtcccagtac
ttctcctcccagtcggtgctcatgggcgccaacagcgaggcggcgctgccccagaggagc
tgcagcgcctccatggacgacagctcgccacggccgccggaagtgcccatcgcctcgcag
cccaggaccccggtccaccgcgtggagcccgtcgccgcctctagccccgcctccctccga
agccctctgctccgccagcggcgcctgaggtgccttgaggacgagctcagcgacgaagac
gaggacggcgggccgacgaagacggaccctctcgtcttcaaaagagcgtccggcgatccc
cggcgggactcggcggtggcgagcgctccgccgccgctctgcagggagggcctcgtgacc
ttgaggaggacggagggcgagtcgttcggcctggacctggaggtcacgtcgccccctctg
aaggtggtggtggtgggcctgaagcccgggggggcagcagagcgggaggcggcggggagc
ctgagccccggagaccagctgctccggatcggggacacgtcggtgcgctcctccacgtac
cgccacatctgtgagctcatgcaccacctcccccggacgctgaccctggaggtcaagagg
ccgctttcagctgtagatcgactgtccagtctgatgatgtcgtcagggagcagtgacggc
gccccgaccctgaacccacctacgtctgttcaggggacatcggatgaaggacaagtaacg
ggtgcaaattctgagaattccaaccacacaacccgaacagacgttcacgtagccgtcacc
gctatcgagggcgtgctatcggaagtgagcgtccgcagtgctcgacggactcctcccccc
tgcaactctttatctccggagcctgcagcctgccatcccagcccgtgtgagaacatccag
gctccggtagagtccggtccactgggctcctccagctcggaggcagggaatagaaacggt
gccgtgccccctgtggagaccctcagctctgctgtgttctatgggcctcatgctggatcg
aagtgcatgtgccccaaaggagaggacagcgactcctccgctggccgccgtgtgccggtc
aatacgactgccggcagtcttcacgaggaggccgtggaggtctgtttgtgtgacggccgg
cgacctgctgcccgagacatatcgccctcgagccagtcagccaacggggcgccatcttct
cagcacgacagcagtcaaaacacagaactggaaccgacctcgccgctctccgctgacgtc
ttaccggcaaacaacgaagactccgtgacaacgagccgagactcgcagccatctcctcca
cttggggtctccgctccggtgcagcaatgccacacttcacctgtggattcctcagagcgc
cacccggatggtgccatggagccctgtgacggaggcccgtctccaccaggtacccacaga
gtcacgaagggtaccactactacacatgtgcatgcagattccttgctgtcctcaacttca
tggaagaacttgaatacacaaacactccattcagctccagtggagtcagaggcctcagct
tcaagaatccaccaattggacacaagagtgtcggcgtcactgacgagcaaagaaaaagct
ttggagtgtagaactaatttaaactcccacgctatctccgtgctcaagaagagctctggg
ctcaaacctcctggtgatcgagactatcccgtttggagcagtagcttcaagctgcaggtt
gaaactcaaatcagactaaacgccaacgttcccaagttgaagggccttgctattaagagt
aggaacacagctcaggaggagccgactggtcgggagagtcccgtatccttaaaccagtcg
ccgaaatacccatcaacacccaccacgtccagctctttgaaagacaagaccccatgcctg
gatttgcccaaagtaagtgaaagaaggccagctgaggccgggccctcagggacctcacaa
acagagatccagttcagctccaaaccgccagccaaggcacacacgaccactcagaggacc
tttatcgaggttcgactgtcttccctgtatggctcttcaccacagagagagacggtgact
ccagaagactctcaacccgctcaaagaggcacagatgcaggaccagcacccacggggtct
cctgccaactccacggcagaaagaactaagggcaaagaagattcaagcccaaccaatggc
tccaaacccagaaccgtggtggagacgagtgaggccctgaagcccagcatgaagacgatg
gacaggcggagcctccccacggacaccgccttgtcctccgtccggcacaagatcaagtcc
tttgagaacctggctaactttgacaagccggtggctaagagcagcgacatccattcgtac
gcgctggcctacagagcctcgctccaccagaggatcgccgggtacatgggcgtggtcaac
tccatcgactgccggtcccggcaaaggagtttcacttcttatgtggagaacctgatgccc
acgacgcgctgctcccctctcctcactacatctccatccagcattacactgaccaacctc
gagctcccacgttccagctgtagcgcggttcccccggcggagggcctccgagcttcggac
ggggcggggccactgaccccccaggtgctgcgcaggaaacacggcaggcttcccctcggc
agcttgcggcagctcagggcgatcagcatgcctgacttggatcaactctgcaccgaggac
ttcggcagcgaccgcggtgcggccgtggagacgaccgagcgcggcggcgacgccgtcctc
cagacggccacagaggcccagagctctccggctcccgcagaccggacgaacgtggatgtg
acccgggacagcggaggtgatgttggatccactgaagatcctcctcagggaaccccagag
acccccggccaaccgcctggctgggccatcagtttcaaggagctggcttcttcccccggc
agtcagagtgctctgctcagcctgctgacctccccggggctccagtcctacgcctcggcc
ctgctgcaggaggcgcaggcgctctcacaggtcaacggtaacactcacctggtggtcctg
agcaaagaggaaggctcggggctcggcttcagtgttgctggtggagtcgacctggagcag
aaggccatcactgtccatcgggtcttcagcaaagggccggcgagcctggaggggaggatc
cagagaggggacagcgtcctgtccgtcaacgggaccagtctggggggtaagacccactcc
gaggtgttctcctgcctccatcaggcccggctgtccactcaggccctcgtggtcatctgg
agggacgaggacggagagctggacgagaagtcttctggagccggaaccggtgggtcccct
gtgccccccccctcactgatgtatgatgtgcaacctcagcaacctcatgatgcccctctc
tgtggtggtgggggtccagacggtgcttcagcggtggagctccacaagtcctccgctggc
ctgggtttcagtctggaaggggggaaggcctcgtcccaggggggcncgccgctcaccgtc
caacgcatcttcaaaggaggcgccacagagctgtccgggctgatggaggtgggcgatcaa
gtcgtgtccatcaacgggcgttctctggagggcctcctgcaccacgacgcctggaaggtc
ctcaaagccaccgaggaagggcccaaccagctcctggtacgcagggcgaggcccctgccc
gtaaagaaccaggccctggagagctga
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