Pseudoliparis swirei (Mariana hadal snailfish): 130197364
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Entry
130197364 CDS
T09868
Symbol
rasgrf2b
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2 isoform X1
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130197364 (rasgrf2b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
IQ
Motif
Other DBs
NCBI-GeneID:
130197364
NCBI-ProteinID:
XP_056275986
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All DBs
Position
7:25053096..25095351
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AA seq
1290 aa
AA seq
DB search
MQKSLRYNEGHALFLSAVARKEGTKRGYLSKKTAENSRWHEKFFALYQNILFYSENEQSA
RPAGIYLLEGCTCERSSAPKMSTTGKEALEKQHYFLIVFGHDGQKPLELRTDEESECDEW
VDAIQQASYSDIIIEREVLMQKYIHLVQIVETEKVAANQLRTQLEDQGTEIERLKSEIIA
LNKTKERMRPYQVNHENEDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYICSPHAESMRKR
NQIVFNMVEAETEYVHQLYILVNCFLRPLRMAASSKKPPICHDDVSSIFLNSETIMFLHE
IFHQGLKARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLLK
QYESNAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELSR
VMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSVERGKLSKVRLGA
LCLKKEGERQCFLFTKHFLVCTRSSGGKLHLLKQGGVLSLIDCTLIEEPDASDEEAKAGG
QSFGQLDFKLVVEPSDLPPFTVVLLAPSRQEKAAWTSDMSQCIDNIRCNGLMTSVFEENS
KVTVPYMIKSDMRLHKDDLDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFLNT
FLHTYRMFTTATVVMGKLADIYKKPFSSIPIRAQFHSFDRLSISPICPDYSLKIKRTAVD
QSKSLELFFATNQNNRSGEHTNDKSPRLCRKFSSPPPLSIQSRTSSPVRTRKLSLHSPIT
ARVGGLDLTSPLSNSSVNQNTSRSAASSPTSAHTPQASSPPLPPPPPSSTSPPPNNSKPP
QDQVPPIPSSPDQSPCSTAEGEDVPKVDPFSGKLRRSIRRALLESVSLEKINPESPQSSE
AGDMSPCHSPSTPRHLRYRQPGVAVGDNSRCPVSPASAFAIATAAAGHVFTNSERTCDKE
FIIQRAATNRVLNVLRHWVSKHSQDFEMNGELKMSVVCLLGEVLRDPDLLPQESKATANI
LSTLSQDEQEDAQLRIEDILKMADCPQAECFESLPAMELAEQITLLDHIVFRSIPYEEFL
GLGWMKVDKTERTPYIMKTTQHFNNMSNLVASQIMTHTDVGSRANSIEKWVAVADICRCL
NNYNGVLEITSALNRSAIYRLKKTWAKVSKQAKTLMDKLQKTVSTEGRSKNLRETLKNCN
PPCVPYMGMYQTDLAFIEEGRPNFTEEGLVNFSKMRMISHIIREIRQFQQTPYRIEHQAK
VTQYLLDKTLIMDEETLYDLSLKIEPRLPA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagcctccgctacaacgaagggcacgcgctgtttctgtcggcggtggcgcgt
aaagaggggaccaagcgcggctacctgagcaagaagacggcggagaacagccggtggcac
gagaagttcttcgccctctaccagaacatactgttctactccgagaacgagcagagcgcg
agacctgccgggatttacctgttggaaggatgcacctgcgagcgctcatccgcgcccaag
atgtccaccactgggaaggaagcgctggagaaacagcactacttcctcatcgtgttcggg
cacgatggacagaagcctctggagcttcggacggatgaggagagcgagtgcgatgaatgg
gtggacgccatccagcaggcaagttactctgacatcatcatcgaacgagaggtgctgatg
cagaaatacatccacctcgtgcagatagtggagacggagaaggtggccgccaatcagctg
cgcacccagctggaagatcagggcacagagatcgagaggctcaaatcagagatcatagct
ctgaacaaaactaaggagcggatgcggccttaccaagtcaaccatgagaatgaagacccg
gatatcaaaaagatcaaaaaggtgcagagcttcatgcggggctggctctgtcggaggaag
tggaagatcatcgttcaggactacatctgctctcctcacgctgagagcatgaggaagagg
aaccagatcgtcttcaacatggtggaggcagaaacagagtacgtccaccagctctacatc
ctggtcaactgtttcctcagacctctgcggatggcggccagctccaagaaaccccccatc
tgccacgatgatgtcagcagcatcttcctcaatagtgagaccatcatgttcctacatgag
attttccatcaaggcttgaaggcgaggatagccaactggccaactctggtgctggctgac
ctgtttgacatcctgctgcccatgctgaacatctatcaggagtttgtgcgtaaccatcag
tacagcctgcaggttctggccaactgtaagcagaaccgagacttcgacaagctgctgaag
cagtacgagtccaacgctgcctgcgaggggaggatgctcgagaccttcctcacatacccg
atgttccagattccccgctacatcatcaccttgcacgagttattggcccacacgcctcat
gagcacgtggaacgaaagagtctcgaattcgccaagtccaaattagaagaactgtccaga
gtgatgcacgacgaggtgagcgacacggagaacatccggaagaacctggccatagagagg
atgatagtggagggctgtgacatcctgctggacaccagccagaccttcgtcaggcagggc
tctctgatccagctgccgtcggtggagcgagggaagctcagtaaggtccgtctgggcgct
ctctgtctgaagaaggaaggggaacgccagtgcttcctcttcaccaaacacttcctcgtc
tgcacgcgcagctctggggggaaactgcatcttctcaagcaaggtggagtcttgtccctg
attgactgcacactcatcgaggaacctgatgccagcgatgaggaggctaaagccggcggc
cagtcgtttggccagctggactttaagctcgtggtcgagccctcggacttgcctccattc
accgtggtgctcctggcaccgtcgcggcaggagaaggcggcatggaccagtgatatgagc
cagtgtatcgataatatccgctgcaatggcttgatgaccagtgtgtttgaggagaactct
aaagtcactgtgccttatatgatcaaatccgatatgcgtctccataaagatgatcttgac
atttgcttcagcaagacgctcaactcctgcaaggtcccccagatccgctacgccagcgtg
gagcggctgctggagaggctgaccgacctgcgcttcctctccatcgacttcctcaacacc
ttcctgcacacctacaggatgttcaccacggcgacggtggtcatggggaagctggccgac
atctacaagaagcccttctcctccattcctatcagggcgcagttccactcatttgaccgt
ctgtccatctcacccatctgtcccgactacagtctgaagatcaagaggacagccgtggat
cagtccaagtccttggagctgttctttgccacgaaccagaacaacagaagtggcgagcac
acaaacgacaaatctcctcgtctctgccgcaagttctcctctcctcctcctctgtccatc
cagtcccgcacctcctcccctgtccgaactcgaaagctctccctccactcccccatcacc
gccagggtgggagggctcgacctgaccagtccgctgtcaaactccagcgtcaaccagaac
acgtcccggtctgccgccagcagccccacatctgcccacaccccccaagcctcgtcgcct
ccccttcctccaccccctccctcgtctacctctcccccgcccaacaactcaaagcccccg
caggaccaagtcccgcccatcccctcctccccggaccaaagcccctgctcgactgcggag
ggggaggacgtgccgaaggtggacccgttttctggcaaactgagacggagcatccgcaga
gcgctgctggagtcggtgtcgctggagaaaatcaacccggagtctcctcagagcagtgaa
gccggagacatgtctccatgtcattcaccttccacacctcgacacctccgctaccggcag
cctggagtcgcggtcggggataactcccgctgcccagtctctcctgcttcagcctttgca
attgccacagcagcagcaggacatgtgtttacgaactctgaaagaacttgtgacaaagag
ttcatcatccaaagagctgcaacgaacagagttctcaacgtgctgcggcactgggtctcc
aaacactcacaggactttgagatgaacggggagctgaagatgtcggtggtctgtctcctg
ggggaggtgctccgagacccagacctgctccctcaggagagtaaagctacagccaacata
ctaagtaccctttctcaagacgagcaggaggacgcccagctgaggatagaggacatctta
aagatggccgactgtccgcaggcggagtgcttcgagtctctgccggcgatggagctggcc
gagcagatcaccctcctggatcacatcgtcttccggagcattccttatgaagagttcctg
ggtctgggctggatgaaggtggacaagacggagaggacgccatacatcatgaaaactact
caacacttcaataacatgagtaacctggtggcatcgcagatcatgacccacaccgacgtg
ggctccagggccaactccatcgagaagtgggttgccgtggccgacatctgtcgctgcctc
aacaactacaacggcgtgctggagatcacctccgcgcttaatcgcagcgccatctaccgc
ttgaagaagacctgggctaaagtcagcaaacaggctaaaaccctcatggacaaactgcag
aagaccgtgtccaccgagggaaggtctaaaaatctgagggagaccctgaaaaactgcaac
cctccgtgtgtgccctacatgggaatgtatcaaactgacttggcctttattgaggaggga
cggcccaattttactgaggaaggtcttgtaaacttctccaaaatgaggatgatatcccac
atcatcagagagatccgacagtttcagcagactccgtacagaatagagcatcaagccaag
gtaacccagtacctcctggataagactctcatcatggacgaagagaccctctatgacctc
tcgctgaagatcgagcccaggcttcctgcctga
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