Pseudoliparis swirei (Mariana hadal snailfish): 130197372
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Entry
130197372 CDS
T09868
Symbol
slc6a4b
Name
(RefSeq) solute carrier family 6 member 4b
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130197372 (slc6a4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130197372 (slc6a4b)
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130197372 (slc6a4b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130197372
NCBI-ProteinID:
XP_056275999
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Position
7:415379..442501
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AA seq
565 aa
AA seq
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MAGSLTQQGALHPGYSSSSAVPVPAIGSRDKWSKKMDFLLSVIGFAVDLGNVWRFPYVCY
QNGGGAFLIPYMLMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGLGYSICVIAL
YVSFYYNTIIAWALFYFYSSFSTILPWTNCDNVWNTPDCTNYFGVDNVTWTNSSRSPAEE
FYTRNVLEMHKSSGLKDVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATFPYI
VLFILLIRGATLPGAWRGVVFYLKPQWGKLLETSVWVDAAAQIFFSLGPGFGVLLALSSY
NPFTNNCYRDAIVTSVVNCLTSFVSGFVIFTVLGYMAEIRQVEVEDVAKDKGPSLLFITY
PEAIANMMGSSFFAIIFFVMMIMLGLDSTFGGLEAIITAVLDEYPERFSQRRELLVLVLV
IVCFLGSLSTLTNGGAYVVKLLEEFGVGCPIIIVCFIEVIAVSWFYGIKQFSRDVESMLG
RAPGLFWKVCWVAISPAFLAFIIVSALREAPPLTLFHYQYPDWSVVVGYCIGLSSFRTSR
LEVCLRPERTMPDVHADGLIADTVL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagtctgacccagcaaggcgcccttcatcccggctacagctccagcagcgcg
gtcccggtgccggccatcggctccagagacaagtggagcaagaagatggacttcctgctg
tccgtcatcgggttcgcggtggacttgggaaatgtttggagatttccgtacgtatgctat
cagaacggaggcggtgctttcctcatcccctacatgttgatggccatcttcgggggcgtg
ccgctcttctacatggagctggcactgggtcagtttcacagaaccggagccatttccatc
tggaaacacatctgccccattttcaaaggtctaggatacagcatctgtgtcatcgccctg
tatgtgtccttctactacaacaccatcatcgcctgggccctgttctacttctactcctcc
ttctccaccatcctgccctggaccaactgtgacaacgtgtggaacacgcccgactgcacc
aactactttggcgttgacaacgtcacctggacgaattcctccaggtctccggcagaggaa
ttttacacgaggaacgttctggagatgcacaagtcgtcggggctgaaggacgtggggggc
gttcgctggcagctgatgctctgcctcttcctcatcttcaccatcgtgtacttcagcctg
tggaagggcgtgaagacgtcggggaaggtggtgtgggtgaccgcgaccttcccctacatc
gtgctgttcatcctgctgatacgaggcgccactctgccgggagcctggcgaggagtggtg
ttctacctgaagccgcagtggggcaagctgctggagaccagcgtgtgggtggacgcggcg
gctcagatcttcttctctctggggccggggttcggggtgctcctggccctctccagctac
aaccctttcacaaacaactgctaccgcgacgccatcgtgaccagcgtggtgaactgcctg
accagcttcgtgtccgggttcgtgatcttcacggtgctgggctacatggcagagatccgg
caggtggaggtggaggacgtcgccaaggacaaaggaccaagtttactcttcatcacttac
ccagaagccattgcaaacatgatgggctcaagcttttttgcaatcatcttttttgtgatg
atgatcatgctgggactggacagcacgttcggggggctggaggccatcatcaccgcggtg
ttggatgaatacccggagcgtttctctcagagacgtgaactcttggttctggtcttagtc
atcgtctgcttcttgggctccctaagcacgctcacaaatggcggggcctacgtggtgaag
ctgctggaggagttcggagtcgggtgccccatcatcatcgtgtgcttcattgaggtcatt
gcagtgtcctggttctacggcatcaagcagttcagccgggacgtggagtccatgctgggc
cgagctccagggttattctggaaggtgtgctgggtggccatcagtccagcatttttagcg
ttcatcatcgtgagcgccctgcgggaggctccgcccctcacgctgttccactaccagtac
cccgactggagcgtcgtggtggggtactgcatcggcctctcctccttcaggacatcacgg
ttggaggtgtgcctccgacccgagaggaccatgccagacgtccacgccgacggcctcatc
gcggacacggtgctctag
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