Pseudoliparis swirei (Mariana hadal snailfish): 130197418
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Entry
130197418 CDS
T09868
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130197418 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130197418 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130197418 (usp30)
04121 Ubiquitin system [BR:
pswi04121
]
130197418 (usp30)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130197418 (usp30)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130197418 (usp30)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
130197418 (usp30)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130197418 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF908
DUF5700
Motif
Other DBs
NCBI-GeneID:
130197418
NCBI-ProteinID:
XP_056276071
LinkDB
All DBs
Position
7:308330..324173
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AA seq
542 aa
AA seq
DB search
MRLCVSSASERSASPSPAGGLSSTTRLSFRNKMLKHWGVVGGLAAALAAGLYVLWGPITK
RRKKQRGMAPGLLNLGNTCFLNSLLQGLAACPSFIRWLEVFSCSRGIQSCRDSQMSSTLL
QLLHALSRDRPGEDDVLDAGGLLAVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQP
KVAHLFDMQSLESPPAQVEETMICRSRAPLHPIPSPWKSQHPFHGRLTSNMSCKRCEQQS
PMRYDSFESLSLALPLPQWGRRISLDQCLQLFISSEAIKEVECENCTKLQQGNTVNGRVL
ESQRTTFIKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFAEHLSMDRYKHHAAAR
RGRPTPRAPLPTEAAGPEGSARGPEAERQSNNNQPFPNGTCPSVLLQAPLGLTCDVRPTE
YLFQLTAVLVHHGDMHSGHFVTYRRSPSSPRSPSSPRSPSSPRSPSSPRSSSSPRSPSSP
RSSSSPRSPSSPRSSPPVSPQWLWVSDDSVRKASRHEVLSSNAYMLFYERVRSVSPALRP
EE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctgtgtgagctcagcctcagagaggtcggcctcaccctctccagcaggaggc
ctctcttcaacaacacgcctgtctttcagaaacaagatgctcaagcactggggcgtcgtg
ggagggctggctgctgcgctggcagctggactttatgttttgtggggcccgatcacaaag
agaaggaagaagcagagaggtatggctcctggtctgttgaatttaggcaacacctgcttc
ctgaactcgttgctccagggcttggcagcgtgtccgtccttcatccggtggctggaggtg
ttctcgtgttcccgtgggatccagtcgtgcagggacagccagatgtccagcacgctgctt
cagcttctccacgctctgtccagagaccggccgggggaggacgacgtgctggatgccggg
ggcctgctggctgttctcagactctacaggtggcacatcagttcatttgaagagcaggac
gcacatgaactttttcatgtccttacatcttctctggaggaggagcgggatcgtcaaccc
aaagtcgctcacttgtttgacatgcagtccctcgagagccctcctgctcaggttgaggaa
acgatgatctgcaggagtcgagcccctcttcatccgataccgagcccctggaagtctcag
catccttttcacggtcgcttaaccagcaatatgtcgtgcaagcgctgcgaacaacaaagt
ccaatgcggtacgactcgtttgagagcctctccctggccctccctttgcctcagtggggt
cgacgcatctctctggatcagtgtctccagctctttatctcctctgaagccatcaaggag
gtggagtgtgagaactgcaccaagcttcaacaagggaacaccgtcaacgggcgagttctg
gagagccagaggacgacgttcattaaacagctcaaacttggaaagctccctcagtgcctc
tgcatccatttacaaaggctgacgtggtccagcgaaggaacgcccatcaagaggcaggag
cacgttcagtttgcggagcatctgtcgatggaccgctacaaacaccacgccgccgcccgc
agaggacggcccaccccacgagcgccgctccccacggaggcagcgggtccagagggttct
gcccgtggccccgaagcagagcgtcagtccaacaacaaccagccttttcccaacggaacg
tgtccgtctgtcctccttcaggccccgctcggcctcacatgtgacgtcaggccgacggag
tacttgttccagctcacggccgtgctggtccaccacggagacatgcactcgggacatttc
gtcacgtaccgccgcagcccttcctcacctcgcagcccttcctcacctcgcagcccttcc
tcacctcgcagcccttcctcacctcgcagctcttcctcacctcgcagcccttcctcacct
cgcagctcttcctcacctcgcagcccttcctcacctcgcagctctccgcccgtcagcccc
cagtggctctgggtgtcagacgactccgtacggaaagccagccggcacgaggtgctgtcc
tccaacgcctacatgctcttctacgagagagtccggagcgtgagcccggctctgcgcccg
gaggagtga
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integrated database retrieval system
