Pseudoliparis swirei (Mariana hadal snailfish): 130197425
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Entry
130197425 CDS
T09868
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130197425 (hnf1a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130197425 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_5
HTH_37
Motif
Other DBs
NCBI-GeneID:
130197425
NCBI-ProteinID:
XP_056276091
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Position
7:8396251..8402251
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AA seq
564 aa
AA seq
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MEERLVERAGAAKAKPSRLTGLQEQLIWALLESGLSRDILVQAIGDLERDRVSAGAERGE
RGDGESSEEGEMDFPPPIFRELEKLLPEEAAKLRAEVDQLLQEDPWHVAKIVKSYMQQHN
LPQREVVESTGLNQSHLSQHLNKGTPMKNTKRASLYTWYVKKQGEISQQFTNAKHGLGSA
EEQGEETRKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEDCNRAECHQRGVSSS
QLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPYPGQSSSSHPNLPPSPEHGVKYS
HHILCDTVSSARGSIGDRVGHPVVSPIQLEPSHTLHETHNSKLVSSGGSLPPVSTLTSLH
SLSASPASSQGLIMTSLPSVMSLGESSLLIGLASTQPQTVPVINNLGGSFTTLQPISFQQ
QQLHGSPQQPISHHFQSYMGTSPFMATMAQLPCHMYNKLDSPQYHTSSLLSQAMVITDSS
SLGTLTSLTAVRQILTADPEEQTDSPLQEDSLHLQPQTPVPASSESLEMYPASQTTDSHQ
SHLLSPSQTDINSYITTQMVSTAQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaggttagtggagagggccggagccgccaaggcgaagccaagccgtttgacc
ggccttcaggagcagctgatctgggccctgctggaatctggactgtcccgagacatcctg
gtccaagccattggggacctggagcgggacagggtgagtgctggcgccgagagaggagag
agaggggatggagagagctccgaggaaggagaaatggatttcccaccgcctatattccga
gagctggagaagcttctcccagaggaggcggccaaactgagggctgaagtagaccagctc
ctgcaggaagacccatggcatgttgctaaaattgtgaaaagctacatgcagcagcacaac
ctccctcagagagaggtggtggagtccacaggactcaaccagtcccatctctcccagcac
ctcaacaaaggcacgcccatgaagaacacgaagagagcctctctgtacacctggtacgtc
aagaagcaaggcgagatcagccagcaatttaccaacgccaaacatggccttggatctgca
gaggagcaaggagaagagaccaggaaggggcggaggaacaggttcaaatggggtccagca
tccctgcagatcctcttccacgcctacgaacgacagaagaaccccagcaaggaggagaga
gagggtttagttgaggattgtaacagggcagagtgtcatcagaggggggtgtcttcctcc
cagcttgctggcttgggctccaacttggttacggaggtccgggtctacaactggttcgcc
aaccggcgcaaagaagaggcattccgtcacaaactggctctcgacacaccttatcccggt
caatcttcctcctctcaccccaacctgccaccaagtcctgagcacggtgtcaaatacagc
caccacatcctgtgtgacaccgtgagctcagctagaggaagcataggggacagagtgggt
catccggtggtcagccctatccaactggagcccagccacacactccacgagacacataac
tctaagctggtgtccagcggtggctcactgcccccagtaagcactctgacctcactgcac
agcctgtctgcctcccctgcttcgtcacagggcctcatcatgacctcactgcccagcgtc
atgagcctgggggagtcctcacttctcattggtttagcctccacgcagcctcagactgtg
cccgttatcaacaacctcgggggaagcttcaccactctccagccaatctcgttccagcag
cagcagcttcatggctctccccagcagccaatatcacaccactttcagagttacatgggg
accagtccctttatggcaaccatggcgcagctgccgtgtcacatgtacaacaagctggat
tcgccgcagtaccatacgtccagtctgctgtctcaagccatggtcatcaccgacagcagc
agcctggggacgctgaccagcctcactgctgtcagacagattctaacagcagatcccgag
gaacagacggactcacctttgcaagaagactctctacacctgcagccacagacgcctgtg
ccagcttcctccgagagccttgagatgtatcccgcctctcagacgaccgacagtcatcag
tctcaccttctctcaccttcacaaacagacatcaactcctacatcactacacaaatggtc
tctactgcacagtag
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