Pseudoliparis swirei (Mariana hadal snailfish): 130197426
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Entry
130197426 CDS
T09868
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130197426 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130197426 (msi1b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130197426 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130197426
NCBI-ProteinID:
XP_056276092
LinkDB
All DBs
Position
7:complement(8374315..8394086)
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AA seq
348 aa
AA seq
DB search
METEGSQICLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGIAPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGSMAAAAAAAVVRGSNQARSAGFLGTNSPG
SMADLYGTAGQESAVSSYLSAASPSPNAGFGHSLGGPLIATAFTNGYH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagatctgcctgtccaccacggactcccctcacgacccctgc
aaaatgttcataggcggactcagctggcaaacaacacaagagggattgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttactaagcgctcg
agagggtttggattcgtcacctttgttgatcaggccggcgtggataaagttttggcccaa
acccggcacgagttggactcaaaaacaatcgatcctaaggttgcgttccctcgcagagct
cagcccaagttagtgactcgaaccaagaagatctttgtgggaggcctgtccgtgaacacg
accatcgaggatgtgaaacaatacttcgaccagttcgggaaggtcgacgatgccatgctc
atgttcgacaagaccaccaacagacacagagggttcggctttgtgacgtttgagaacgag
gatgtggtggaaaaagtctgcgaaatccacttccacgagatcaacaacaaaatggtggaa
tgtaagaaagctcagcccaaagaggtgatgtcccccacgggctcagccagggggcgctcc
cgtgtgatgccatatggaatggacgccttcatgctgggcattggtatgctaggttatcca
ggcttccagacagccacctacaccagtcggagctatgctggcatcgctcctggatacacc
taccagttccctgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctgaccgcttatggatccatggcagcagcagcagcagcggca
gtcgttagaggctccaaccaggctcgctcagctggatttttaggtacgaacagcccgggg
tcgatggcggacctttatggaacggccggtcaggagtcggctgtcagcagctacctcagt
gctgcaagcccctccccaaacgctggattcggccacagtttggggggccctttgatcgcc
acggccttcaccaacggctatcactga
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integrated database retrieval system
