Pseudoliparis swirei (Mariana hadal snailfish): 130197518
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Entry
130197518 CDS
T09868
Symbol
cirbpa
Name
(RefSeq) cold inducible RNA binding protein a isoform X1
KO
K13195
cold-inducible RNA-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130197518 (cirbpa)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130197518 (cirbpa)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
130197518
NCBI-ProteinID:
XP_056276188
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All DBs
Position
8:13547913..13552715
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AA seq
187 aa
AA seq
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MSDEGKLFIGGLSFETNENSLAAAFGKYGTIEKVDVIRDKETGKSRCFGFVKYDNSEDAK
DAQDGMNGKTLDGRSIRVDEAGNGGRSRGGFGSGGPRGQRGGGFGGRGRGGGGGGGYNGD
RSYGDRSYGERSFHSEGRFSGNQYRNSGGGGGGGGGYSSYRDNRGQGGYAGRGTSYRDGY
DGYAANE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagggtaaactgttcatcgggggcctgagcttcgagacgaacgagaactct
ctggccgcggccttcggcaaatatggaaccatcgaaaaagtggatgtgatcagagacaaa
gaaacgggaaaatctcgctgttttggcttcgtgaaatacgacaactcagaagatgccaaa
gacgcacaggacggcatgaacggcaagactctagatggacggtcaattcgtgtggatgaa
gcaggaaacggtggacgctccaggggaggttttggatccggtggcccaagaggacagcga
ggaggaggatttggcgggcgtgggcgaggtggtggtggtggtggtggatataatggcgac
cggagctatggtgacaggagttacggcgaaagaagcttccactctgaagggaggttttct
ggcaaccagtacaggaatagcggcggcggcggaggaggcggcggcggatactcaagctac
agagacaataggggtcagggtggatacgccggccgcggtacatcctaccgtgatggatat
gacggctacgctgcaaacgagtaa
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