Pseudoliparis swirei (Mariana hadal snailfish): 130197519
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Entry
130197519 CDS
T09868
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130197519 (chd7)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130197519 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
130197519
NCBI-ProteinID:
XP_056276191
LinkDB
All DBs
Position
8:22097940..22163224
Genome browser
AA seq
3241 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDELDGLGDCFPQQPASAQSNPLAQETNPSLNHEQQGTRSYHQ
GMIHSTVPGPGQPKLGQIYDHGPYTGYDQPGAPGGRMIAQNGPSQGPPNVNTAMNGMASH
YHNNPANSSNPLHGYPGDAGGGGSGGGVWGQQQQQAQQTRSAYQQPPAQPGGGPNQMGAY
QMSQGNYGGMQVTPTPNAARMNQLYPSQSMVPPPAQDPAHYLGHVGIGGAQMRHPQPQSQ
PQGYPNMGPTPRYPHSPSRQPPHQQGMGGFGGAQYPGYQAQYGAMGPGMGQSANSNVNAN
TSQAMGPAQLGQRFNQASTPAAGPQGQRYPPGPAHQAQPLPTHSAPMQQAGKQGQPMHPQ
SLPQTQNQPQSQLVPPAQGTYPSPSSMSPMRVLGTPTPPPQQGRPPSAGLAGAPEVAGYT
ALQSQPNALAQRPPQIPLSAPQHQQPPSAGQMYTGLGPQRGPQMGPSRPQQGPLEAPACQ
GGDQRLLQAPQQGPRSGLPNPMGFQGPVVGQHGAPLQGLAAPAQSAPVQHAHMSAQPHHL
QSTPPPPNQAAHPWAPPASHSLSSPPLTPQKVPHVQHSPIDPSGDASMKVPDRPAVGVCS
PGQPISTEQPGNQETKPKKKRKKKAKVASGEKEEGGKNAARETPAAAGGAEEDVKSEFPG
TGSDAGERVTGKGTVEGSSPPVEEKKKRKKKPKEKVEGKEPKTPKTPKTPKEPKEKKTKS
STPKTKTPKRTSSKKVESEGGASAAKKESKRKREQSISDDVEVKSPPPSPLEEDDDDGVQ
KRRSSRQVKRKRYTEELEFRISDDDNNSGDDSPAPKSPSSSQQQDMVETEGPVVEKIMSK
RITKKQLESGEDLEVEEFYVKFKGFSYLHCRWADLEELEKDKRIHQKVKRFRAKQQLNSF
ITEMDDEPFNPDYVEVDRVLDISESPDENGETVTLYLVKWCSLPYEDSTWELKADINLSK
IEEYERIAARTPNTTKLDRPTPADWKKLEGSVGYKNANALREYQLEGLNWLTFNWYNSRN
CILADEMGLGKTIQSITFLHEIFMKGMEGPFLVIAPLSTIPNWEREFRTWTELNAVVYHG
SQASRKTIQAYEMYYRDAQGKIIKGAYRFHALITTFEMILTDCPELRSVPWRCVVIDEAH
RLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPEQFPSEPTFMTEFGD
LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSF
LSKGGPGGGGGGSGGGGPNVPNLLNTMMELRKCCNHPYLINGAEEKIAEDFRDAHGGWAD
MPDMALQAMVQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERI
DGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA
QARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNATSGAQPLS
KKEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILKRRTHTITIESESKGSTFAKASFVA
TGNRTDISLQDPDFWQKWAKKAELDLDAINGRNTLVIDTPRVRKQTRHFSSAKEDEMLEF
SELESDEDEPSKPSSKPRRPQDKAQGYPRSECFRVEKNLLVYGWGRWSDILAHGRFKRPL
KEADVETICRALLAYCLLHYRGDENIKSFIWDLITPSADGTTKTLTNHSGLSTPVPRGRK
GKKGKPLAPPPQTPRADWLASCNPDHLLQEESYKRHLKHHCNKVLLRVRMLYYLRQEVIG
DQAERILEGADSSELDIWIPQPFHAEVPTDWWESEGDKSLLIGVFKHGYEKYNSMRADPA
LCFLERVGMPDAKAIAAEQRGSDMMADGVEGEDEDPEYKPLRMPFKEEMDDFTNSPLDDK
DNIVDADAEVKLGENGQAVGGASGSNERLYWPAGSALTARLRRLITAYQRSNRREQLRQE
ALSRPDGRRRRRREFLPADGTVADSGAGGGATCIQDGAAVFLSDGTQYLTKGGAYFAKGG
PFLPEASPVMTAGSLMTDGAMYYKERRQRWTRREEADFYRVVSTFGVVYDTQHKKFDWAQ
FRAFARLDKKTDESLEKYYYSFIAMCKRVCRMQVKTDTELPDPTLIIDPITEERASRTLY
RIELLRRIREQVLPHPLLSERLKLCQASQDLPEWWESGRHDRDLLLGASKHGVSRTDYHI
LNDTALSFLDAHQRFTGQRGGGAAVQGDVAKAGTGAPESNAAAPLLTAAELASAAAAANV
AVIAAKEEEEEGSEGKEVKMETEQGDGDDVPPIKTETVDEQKGIEGEVREVREVREVGEG
KEESAASPRTEVEEEEDKPKVENEQKEEEPSVEGETSSKLADGQDEEKSSTPAASPRDQT
EATADSSPKDLPGLQEAEQEHREEGQQPESPKSPKSADTEKSLEEEEEERMDEDDKSEKS
SQAEASAASEQKNFDEESIASLSTSAQNETRDGFCPDDLPETSALQALQDRAYSFWPKDR
VMINRMDNICDAVLKGKWPVNRRHIFDFPSNLLPGHGSAAATTVATVTESPLQRRSLPEL
TMAGIPTAFSGTEDKTLSPQVHEDALSLTAPRQRRRRRRKIEIEAERATKRRNLMEMVAQ
LRESHSATESQSQAIDLTKGMHHQHKASPSMAGFPSALVTGPSLKAQMELLQQAPPSGHR
ANGSLEVDLPITRRRRGRRKNVEGLELLFMGNKRAEDADGAKASSAEGVRDAARALGPLA
VAEPSPGSRSLASGSLEEEEGAATNKELGEWLRQHPTYTMDMAGFTQKSEDVLSQFSKPK
QKRHRCRNPNKIDINTLTGDERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEYSIAPD
WTDIVKQSGFLPEAMFDRLLTGPVVREEGVRRRGRRPKSEIAKAAVAAQAAAATHAAQAS
LASAASSGGLNPLLLSSLFGGIDLSSLQSLQSLQLAAGLMAFPHPSDPKQAAASMLPLML
PGMGGLPTMFGLGGLFGGNLVTVASSNSLAAASRNTNGTTAGDGDETAKRKRREGDDRED
EEEEEEADGDGAKKPRKKEKSFSSGAADSSSDMCMNGDAAALLAAAGMSAGSLAFNPFLL
STMAPGLLYPSMFLPPGLGGLSLPGFPGASTLADLQNAMAGALGGGALIAHTPKEEELEE
LEEKAGLKASGAEDEEEEEVMGGGGKIDLEDAAEETRGDDSAPEEEEGGGKAASPQKEKS
D
NT seq
9726 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccgggatgttgagtttattcggggacgatgcagggctgttctccgatgaa
ttggatggtttaggggactgctttccccagcagccggcctccgcccagtccaaccctttg
gcccaggagacgaatccctctctgaaccacgagcagcagggaaccaggagctaccaccag
gggatgatccacagcacggtgcctggtcccgggcagcctaaactggggcagatctacgac
cacggcccctacacgggctacgatcaacccggggcccccggaggacgaatgattgcccag
aacggtcccagccaggggccgccgaacgtgaacacggccatgaatggtatggcttcccac
taccataacaacccagctaactctagcaaccccctccacgggtacccgggcgacgcgggc
ggaggaggaagcgggggtggcgtttggggccagcagcagcagcaagcgcagcagaccaga
tcggcttatcagcagcctccggcacaaccggggggcgggcccaaccagatgggagcctac
cagatgtctcaaggcaactacggtgggatgcaagtcacgcctacacccaatgcagctcgc
atgaaccaactctatccgtcgcagagcatggtgccccctccggctcaagacccggctcac
tacctggggcatgttggaattggtggtgctcagatgagacacccccagccccagtcacaa
ccccagggctaccccaacatgggccccacaccccgatacccacactccccctcccgacag
ccgccgcaccaacaaggcatgggagggtttgggggcgcccagtaccctggctaccaggcc
cagtatggagccatgggacctgggatgggccagagtgccaactctaatgtcaatgctaac
acaagccaggccatgggaccagcgcagctcggccagaggtttaaccaggcatcaacccca
gccgctgggccacaggggcagcgataccctcctggaccggcgcaccaagcccagcccctt
ccgacccattctgccccgatgcagcaggcggggaagcagggccagcctatgcaccctcag
agtctgccccagacccagaaccagccccaatcccaacttgtccccccagctcagggaacc
tacccctccccctcatccatgtcccccatgcgggttctgggaaccccgacccctcctccc
cagcagggcagaccccccagtgcggggctagctggggccccggaggttgcagggtacaca
gccctgcagtctcagcccaatgctctggcccagaggcctccccaaatccctctgtctgcc
ccacaacaccagcagccccccagtgcggggcagatgtacaccggcctggggccacagcgc
ggtcctcaaatggggcccagcaggcctcagcaagggcctctggaagctcccgcctgccag
gggggggaccagcgtctgctccaggccccgcagcagggcccccgcagcgggcttcccaac
cccatgggtttccagggtccggtcgtcgggcagcacggcgccccgctccagggcttggcg
gcgcccgcccagagcgctccggtgcagcacgcgcacatgtccgcccagccgcaccacctg
cagagcacgccccctccccccaaccaggccgcccacccctgggcgcctcccgcctcccac
tcgctctcctcaccccctctcaccccacagaaagtgcctcacgtacagcattcccccatc
gacccgtcgggcgacgcctcaatgaaggttcctgaccggccggcggtcggcgtctgctcc
cccggccagcctatcagcacagagcagcccggcaaccaggagaccaagccaaaaaagaaa
aggaagaagaaagcaaaagtggcgagcggagagaaagaagagggagggaagaacgcggca
agagaaacgccggcggcggccggaggcgcagaggaagacgtgaagtctgaatttcccggc
acaggaagtgatgcgggtgagcgggtgactggcaaaggaacggtagagggaagttcacca
ccggtggaggagaagaagaagcgcaaaaagaaaccaaaggagaaggtggagggcaaggag
cccaagaccccgaagacacccaagacccccaaagagcccaaggagaagaaaaccaagagc
tccacgcccaagaccaagacccccaagagaaccagcagtaagaaggtcgagtctgagggc
ggagccagcgctgctaagaaggaatccaagaggaaaagagagcagtcgatcagcgacgac
gtggaggtgaagtctccgcccccctcgcctctcgaggaggacgacgatgacggcgtacag
aagcgtcgctccagccgccaggtgaagaggaaaaggtacacggaggaactggagttccgg
atctcggacgacgacaacaacagcggagacgactcgccggcgcccaagtccccgtcgtcg
tcacagcaacaggacatggtggagacagaggggcccgtcgtggagaagatcatgagcaaa
cgcatcaccaagaaacagctggagtcgggggaggatctggaggtggaggagttctacgtc
aagtttaagggcttttcgtacctgcactgtcgctgggcagacctggaggagctggagaag
gacaagaggatccaccagaaggtcaagaggttccgggccaagcagcaactcaacagcttc
atcacagagatggacgacgagccttttaaccccgactacgtggaggtggaccgcgtcctg
gacatttcagagagcccagacgagaacggagagacggtgaccttatacctggtgaaatgg
tgcagcctgccttacgaagactccacctgggagctgaaggccgacatcaacctgtccaag
atcgaggaatacgaacgcatcgcagcgcgcacacccaacactacgaaactggatcgtcca
actccagccgactggaagaagctggagggctccgttggctacaagaatgccaacgcactc
agggaataccagctggaaggcctcaactggctcaccttcaactggtacaactcacgcaac
tgtatcctggcggacgagatgggtctcggcaagaccatccagtcgatcacattcctccac
gagatcttcatgaagggcatggaggggccgttcctggtcatcgcgccgctctccaccatc
cccaactgggagagggagttcaggacctggaccgagctcaacgcggtggtctaccacggc
agccaggccagccgcaagaccatccaggcctacgagatgtactacagagacgcacagggt
aagataataaagggagcgtaccgcttccacgccttgatcacgaccttcgagatgatcctc
accgactgcccggagctgcgcagcgtgccgtggcgctgcgtggtgatcgacgaagcccac
cgcctcaaaaaccgcaactgcaaactactggaaggactgaaaatgatggacatggagcac
aaggtcctgttgacggggactcctctacagaacaccgtggaggagctcttcagcttgctc
aacttcctggagcccgagcagttcccatccgagccgacgttcatgactgaattcggagac
cttaagactgaggaacaggttcaaaagctgcaggccatcctgaagcccatgatgctgagg
agactgaaggaggacgtggagaagaacctggcccccaaggaggagaccatcatcgaggtg
gagctgaccaacatccagaagaagtactaccgggccattctggagaagaacttctccttc
ctgtccaaaggaggcccgggaggaggaggtggtggtagcggagggggaggacccaacgtc
cccaacctcctcaacaccatgatggagctgaggaagtgctgcaaccacccctacctcatt
aatggagcggaggagaaaatcgccgaggatttccgcgacgcccacggcggctgggcggac
atgccggacatggccctgcaggccatggtccaggccgccgggaagctggtgctcatcgat
aagctgctgcccaagctgaaggccggcggccaccgggtcctggtgttcagccagatggtc
cgctgcctggacatcctggaggactacctcatccagaaacggtatccctacgagcggata
gacggccgagttcgcggcaacctgcggcaggcggccatcgaccgcttctccaagcccgac
tcggaccgcttcgtcttcctgctgtgcacgcgggccggaggactcggcatcaacctgacg
gcggcggacacctgcatcatcttcgactccgactggaacccccaaaacgacctgcaggcc
caggccaggtgccaccgcatcggccagtccaagtcggtgaagatctaccgcctgatcacc
aggaacagctacgagagggagatgttcgacaaggccagcctgaagctgggcctggacaag
gccgtcctccagagcatgagcgggcgggacaacgccaccagtggggctcagccgttgtcc
aagaaggaggtggaggacctgctgaggaagggagcgtacggggctctgatggacgaggag
gacgagggctcgaaattctgcgaggaagacatcgaccagatcctaaagagacgaacccac
accatcaccatcgagtccgagagcaagggctccaccttcgccaaggccagcttcgtcgcc
acgggaaaccgaaccgacatttccctgcaggacccggacttctggcagaaatgggccaag
aaagccgagcttgacctggacgccatcaacggacggaacacgctggtgatcgacacgccg
agggtgaggaagcaaacgcggcacttcagcagcgccaaggaggacgagatgttggagttc
tccgagctggagagcgacgaggacgaaccgagcaagccctcgtccaaaccccggaggccc
caggacaaagcccaggggtacccccggtccgagtgcttcagggtggagaagaacctgctg
gtctacgggtggggcaggtggagcgacatcctggctcacgggcgcttcaagcggcccctg
aaggaggcggacgtggagacgatctgccgggcgctgctggcctactgcctgctgcactac
cgcggagacgagaacatcaagagcttcatctgggacctcatcaccccgagtgctgacggg
accaccaagacgctcaccaaccactccggtctctccactccagtccctcggggcaggaag
ggcaagaaggggaagcccctggccccgcctccacagacgccgcgagccgattggctggcc
agctgcaacccggaccacttactgcaggaggagagctacaagagacacctgaaacaccac
tgtaacaaggtgctgctgcgcgtgaggatgctctactacctgcgacaggaagtcatcggc
gaccaggccgagcgcatcttggaaggagccgactccagtgagctggacatctggatccct
cagccgttccacgccgaggtcccgaccgactggtgggagagcgagggggacaagtcgctg
ctcatcggcgtcttcaagcacggctatgagaagtacaactcgatgcgggccgaccccgcc
ctgtgtttcttggagcgggtgggcatgcccgacgccaaggccatcgccgcggagcagagg
ggctccgacatgatggcagatggcgtcgagggtgaggatgaggatccagagtacaagccc
ctgcggatgcctttcaaagaagagatggacgacttcaccaactccccactggacgacaaa
gacaacatcgtggacgccgacgcggaagtcaaattgggtgagaacggccaagcggtgggc
ggagcctctggctccaacgagcggctctactggccggcgggctcggcgctcaccgcccgc
ctgcgccgcctcatcacggcctaccagcgctccaaccgcagggagcagctccgccaggag
gccctcagccggcccgacgggcggcggcggcgccgcagggagttcctgcccgccgacggc
acggttgccgactccggggccggaggaggggcgacttgcatccaagacggagcggcggtc
ttcctgtcggacgggacccagtacctgacgaagggaggcgcctacttcgccaaaggtggg
cccttcctgccggaggcgtcgccggtgatgaccgccggctcgctgatgacggacggagcg
atgtactacaaggagcggcgccagcggtggactcgccgcgaggaggccgacttctaccgc
gtggtgtcgaccttcggggtcgtctacgacacccagcacaagaaattcgactgggctcag
ttcagggccttcgcccggctggacaagaagacggacgagagcctcgagaagtactactac
tccttcatcgccatgtgcaagcgggtctgcaggatgcaggtcaagaccgacacggaactc
ccggacccaacgctgatcatcgaccccatcacggaggagcgcgcctcccggaccctctac
cgcatcgagctgctgcggcgcatccgggagcaggtgctcccccacccgctgctctcggag
cgcctgaagctctgccaggcgtcccaggacctccccgagtggtgggagagcggccgccac
gaccgcgacctcctcctgggcgcctccaagcacggcgtgagccggacggactaccacatc
ctgaacgacaccgccctctccttcctggacgcccaccagcgcttcacgggccagcggggg
ggcggcgcggcggttcagggcgacgtcgccaaggcggggacgggagcgccggagagcaac
gccgccgcgcccctcctcactgccgcggagctggcgagcgctgcggcagctgccaacgtt
gccgtcatcgcagcgaaagaagaggaggaagagggcagcgaagggaaggaggtgaaaatg
gaaactgagcaaggggacggtgacgacgttccaccaatcaaaactgaaaccgttgatgaa
cagaagggaattgagggagaggtcagagaggtcagagaggtcagagaggtcggagaaggg
aaggaggaaagcgctgcttcgccgagaactgaggtagaggaagaggaggacaagccaaaa
gtggagaatgagcagaaggaggaggagcctagcgtagaaggagagacgagctccaagctg
gcagacggccaagacgaagagaagagctcgactcccgccgcctcccccagggaccagacg
gaggccaccgcggactcctcccccaaagacctgccgggcctccaggaggccgagcaggag
cacagggaggaggggcagcagccggagtctcctaaatctccaaagtcggccgacaccgag
aaaagccttgaggaggaggaggaggagaggatggacgaagacgacaaatcggagaaatcc
tctcaggctgaagcgagcgctgcgtccgagcagaagaactttgacgaggagagcattgcg
tcgctgagcacatcggcccaaaacgaaaccagagacgggttctgccccgacgacctgccg
gagacgtccgcccttcaggccctgcaggaccgcgcctactccttctggcccaaggatcga
gtgatgatcaacaggatggataacatctgcgacgccgtcctgaagggcaagtggcccgta
aacaggcgccacatcttcgacttccccagcaacctgttgccggggcacggctctgccgcc
gccaccaccgtcgccacagttaccgagagcccgctgcagaggcggagcctccccgagctg
acgatggccggcatccccacggctttcagcgggactgaagataaaacactatcgccacaa
gttcacgaggacgctctgagtctgacagcacctcgccagaggaggaggaggaggaggaag
atcgagattgaggcggagagggcgaccaagaggcgcaacctgatggagatggtggctcag
ctgagggagagccactctgccaccgagtcccagagccaggccatcgacctcaccaagggc
atgcaccatcagcacaaggcctctccctcaatggccggcttccccagcgccctggtgacc
ggcccctccctcaaggcccagatggagttgctgcagcaagccccgccctccggacacaga
gccaacggctcgctggaggtcgacctgcccatcacgaggaggaggcggggccgcaggaaa
aatgtggaaggcctggagctgctgttcatgggcaacaagcgagcggaggacgccgacggc
gccaaggcgtccagcgccgagggcgttcgggacgccgcccgggccctcgggcccctcgcc
gtcgccgagcccagccccggctccaggtccctggcctccggcagcctggaggaggaggag
ggggcggcgaccaacaaggagctgggggagtggctgaggcagcaccccacctacaccatg
gacatggccggcttcacacagaagagcgaggacgtcctgtctcagttctccaagcccaag
cagaagcgtcatcgctgccggaaccccaacaagatcgacatcaacacgctgaccggagac
gagcgggtgcccgtggtcaaccggcgcaacggacgcaagatgggcggggccatggctcca
ccaatgaaggagcttcccaggtggttgctggagaaccccgagtattccatcgcccccgat
tggacggacatcgtcaagcagtctggtttcctcccggaggccatgtttgaccgcctgttg
accggacccgtcgtcagggaggagggcgtccgtcgtcgggggcgacgaccgaaatctgag
atcgccaaggccgccgtagccgcccaggcagcggcggcgacgcacgccgcccaggcgtcg
ctggcctcggccgcctcatcgggtggcctcaaccctctgctgctcagcagtctgttcggg
ggcatcgacctgtcgtcgctgcagagcctccagtccctgcagctcgccgccggtctgatg
gcgttccctcacccctccgaccccaagcaggccgccgcctccatgttgcccctcatgctg
cccggcatgggcggcctgcccaccatgttcggcttgggcggcctcttcggcgggaacctc
gtgacggtcgcctcctcgaactccctcgccgccgcgtctcggaacaccaacgggacgacg
gcgggagacggcgacgagacggccaagaggaagaggcgagagggagacgaccgcgaagac
gaggaggaagaggaggaggccgacggggacggagcgaagaagccgaggaagaaggagaag
tcgttctcctccggcgcggccgactcgtcgtccgacatgtgcatgaacggcgacgccgcg
gcgctgctggccgccgccggcatgtcggccggctccttggccttcaacccgttcctcctc
tccaccatggcgcccggcctcctctacccctccatgttcctgccgccgggcctcgggggg
ctcagcctgcccggcttccccggcgcctccaccctggccgacctgcagaacgccatggcc
ggagccctggggggcggcgccctgatcgcacacacccccaaggaggaggagctggaggag
ctggaggagaaggcggggctaaaagcttcaggagcggaggacgaagaggaggaggaggtg
atggggggaggaggaaagattgacttggaggatgcagcggaggagacgagaggcgacgac
tcagcccccgaggaagaggagggcggggggaaggcagcgtctccacagaaggagaagagt
gactga
DBGET
integrated database retrieval system
