Pseudoliparis swirei (Mariana hadal snailfish): 130197583
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Entry
130197583 CDS
T09868
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130197583 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130197583 (arhgef18a)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130197583 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
130197583
NCBI-ProteinID:
XP_056276293
LinkDB
All DBs
Position
8:complement(7030960..7049741)
Genome browser
AA seq
971 aa
AA seq
DB search
MTVTPKKHIIQPGSSSFKNTSPRSSPMQMDEVEGLRVKLISEDSVSLASSLAEPINLEDS
HYALLRGELESDHQNLEAESWGVAVDQNYLRALTKEEVKRQEVIYELIQTEKHHVRTLKI
LLHVYMHQLKKSSLIEEARLERFFPGVEDMLTLHQHFLDCLKVRKHQSQEEENPNNYQIT
QLGDILIAQFSGPLGDRMMGYYSQFCGNHIEAISLYKEQLQSNKKLQLLIRKIGQLPLVR
RLGIPECFLLVTQRITKYPVLVERIIENTEADTDEYKSLVQGLALIKDTISQVNEQVREH
ERATRQREIALRLEPKSQGRLKDGRLLRREDLIHGNRTLIHEGTFTWKSSGRQKEIHAVL
LSDVLLLLQEKDQKLVFAAVDNKPPVIALENLIVREVAHDDKAMYLISECTTSTPEMYEI
HTRSREECITWTVLIREAVNCYPEEELYLKLTATLQQFQDNLKMRDELIMQCLTEKQQLF
AALYETITEQETPHKGLLLRGDATDLQQGTTLLKGAINEVENLQNLLFTRIRDPNLLMEV
NEAQEGPLWKAETFGVADTNPDENDDDAALTTSDPQLQESHSSASLEQSVSETDDDDYTQ
TPNCKFTSSNFSEAEVCDKVILLAQRLYSLEAIIAQQDSQIELQHAFQTKSKQPSRHYSS
VLLEQEKQRNSEKQKEKLANMHKLQAQHQEEQQRWEKEKEQQRMQIESLEARLQQREVDC
REWEEKLNEEKFELESLKESYQEDLERLRESTRSVDKDKERLCQERERLEQLQEKIKKIY
PGNYDDPAQFLSLSSHQSFRGSVVNGGGTLTRKLQLMAKNSNSVEIPPKVPPRRESMSPL
QVHLISSTNLLHKSASMQQQIPTKLAALSKGKEKVSKKKGSHQRTHSAASIDVNQMLPIR
VTGLEGGSLRGKSNSRPATYLSGAFNSPASGHSGKISQSFSAHKRTYEAPPRPPPFPTEV
LDAGKEKVTFL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacccctaaaaaacacataattcagcctggttcctcctctttcaaaaacaca
agtcccagatccagtcccatgcagatggatgaggtcgaaggcctccgggtgaagctcatc
tctgaggactctgtgtcgctggcttcctctttggctgagcccatcaacctagaagattcc
cattatgctctgctgcgaggagagctggagtccgaccaccagaacctggaggcggagtcg
tggggcgtggctgtggaccagaactacctgagggccctgaccaaagaggaggttaagaga
caggaagtcatctatgagttgatccagacggagaagcaccatgtacgcaccttaaaaatc
cttctccatgtctacatgcaccagttgaagaagtcttcgctgatagaggaggccaggctt
gagaggttcttccctggggtggaagacatgctcacgctccatcagcacttccttgactgc
ctcaaagtgcgcaaacaccaaagtcaggaggaagaaaacccaaacaactaccagatcaca
cagctgggagatattctcatcgctcagttttcaggtccacttggagacagaatgatgggg
tattacagtcagttctgcggtaatcacattgaagccatcagtctctacaaagagcagctg
cagagtaacaagaaattgcagctccttattaggaaaatagggcagcttccccttgtgcga
cggttgggaatccccgagtgttttctgttggtgactcaacgcatcaccaaatatcccgtc
ctggttgagcgaatcatcgagaacactgaagcggacacagacgagtacaagtctctggtg
cagggcttggcgctgatcaaagacaccatctcgcaggtgaacgaacaggtcagggaacac
gagagagccactcgtcagagagagatcgcccttcgcctggagcccaaatctcagggccgg
ctgaaggacggccggctgctccgcagggaggatctgatccatggaaacaggaccctgata
catgaaggcaccttcacctggaagtcctccgggagacaaaaagaaattcatgctgtgctg
ctgtcagacgtgctcctcctcttacaagagaaagatcagaagcttgtgtttgctgctgtg
gataacaaacccccagtgatcgcccttgagaacctaatagttcgggaggtggctcatgat
gacaaagccatgtaccttatctctgaatgcaccactagcacgccggagatgtacgagatc
cacacgcgctccagggaggaatgcatcacatggacggtgctgatacgagaagctgtgaac
tgctacccagaagaggagctgtaccttaaactgaccgctacactgcaacaatttcaagat
aatctaaagatgagggatgagctgataatgcaatgtctgacggagaagcagcagctcttt
gctgctctctacgagactatcacggagcaggaaacgccccacaaagggctgctgctccga
ggtgacgccactgacctccagcaggggaccactctgctcaaaggagccatcaatgaggtg
gaaaacctgcagaacctgctcttcacaaggataagagacccaaaccttcttatggaagtg
aatgaggcgcaggaggggccgctctggaaggccgagacctttggagtggctgatactaac
cctgatgaaaacgacgatgatgcagctctcaccaccagtgaccctcagctccaggaaagt
cacagctctgcgagcctggaacagtctgtgagtgagacggatgatgatgactacacacag
acaccaaactgcaagttcacctccagtaatttttctgaggcagaggtgtgtgacaaggtg
atactgctcgcacagaggctgtacagcttagaagcaataatcgcccagcaggacagccag
attgagctgcagcacgcttttcagacaaagagcaagcagccctctcgtcactacagcagt
gtgctgctggagcaggagaagcagcgcaactctgagaagcagaaggagaagctcgccaac
atgcacaagctgcaggcgcagcatcaagaggagcagcagcgctgggagaaggagaaggag
cagcagaggatgcagatcgagagtctagaggctcggctgcaacagagggaggtggactgt
cgagagtgggaggagaagctcaatgaagagaagtttgagctggagagcctgaaggaaagc
tatcaggaggacctggagaggctgagggagtccacaagatcagtggacaaggacaaggag
cgtctatgtcaggagagggaacgcctcgaacagctgcaggagaaaataaagaagatttat
ccgggaaactatgatgatcctgcacaattcttgagtctctccagtcaccagtcgttcagg
ggaagcgtcgtgaacggaggtgggaccttaacccgaaagctccaactgatggccaaaaac
tccaactccgtggaaattcctccaaaggttccgccgcgcagggagagcatgagccccctg
caggtccacctgatcagctccaccaacctgctgcacaagtctgcgtccatgcagcagcag
atccccaccaagctggcggctctgtccaaggggaaggagaaagtctccaagaagaaaggc
tcccaccagagaacgcacagtgcagcctctatcgacgttaaccagatgctgcccatccga
gtgaccgggctagaaggaggcagtctgagaggcaaaagtaacagcaggccagcaacctac
ctgtcaggtgccttcaactcaccagcatctggccacagtgggaagatatctcagtccttc
agcgcacacaagaggacctacgaggctccaccacggccgcctccttttcctactgaggtt
ctcgatgcgggcaaagagaaggtaacattcctttaa
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