Pseudoliparis swirei (Mariana hadal snailfish): 130197585
Help
Entry
130197585 CDS
T09868
Name
(RefSeq) excitatory amino acid transporter 1-like isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130197585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130197585
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130197585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
130197585
NCBI-ProteinID:
XP_056276305
LinkDB
All DBs
Position
8:complement(7236065..7242573)
Genome browser
AA seq
551 aa
AA seq
DB search
MDRFSCHVVVIHTINLLYSCMVLFIVTSSVKSYKMNFLMVHVLYRSVFYCLEGTLLSEMK
PSLMELSVLDSVEVREPQKTQTYVQCDKPSRHLPNVVAFLIRNAFVVSTMAAVALGIGTG
FALRHINMSAKDVTYLTFPGELLMRLLQMLVLPLIISSVIAGLSSLDRMAFGEIGLKAFS
YYMVTTCISTFTGITLAVLIQPGKSSRTASVSSSGNTEDVQTVDSFLDIIRNMNPSNLVE
ACFRKYKTVYSRSMPATSDNNDTVPGPGTSDGLNILGLLFFSVAFGLILSSMGNEAKPLR
DFFECLNKAIMHLVNMVIWYSPVGLFFLLAGQIVKMKDSGEIGLGVVMYTLTVITGLLIH
SLLTLPLIYFIFTRKNPFRFMLGLLQALTIAFGTSSSSAALPITLSCMEENHNMNKQVTR
FMLPIGATMNMDGAALYEAVAALFIAQIHNMDFNLGQIIALSLIVTVASTGAAGIPQAGM
VSMILVLDSVGLPTEDISLLMIVDWILDRLRTTTNVLGDCVGVGVVQHLSKKELQCCSPA
DTDFEEDRFQM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacagattttcatgtcatgttgttgttattcacactattaacctgctttacagttgt
atggttttatttattgtgacaagctcagtaaagtcttataaaatgaatttcttaatggtc
catgttttatatagatctgtgttttactgtttggagggaacactcttgtcagagatgaag
ccgagccttatggagctgtctgtgttggactcagtagaggttagagaaccccagaaaacc
caaacatacgtccagtgtgataagccctcacgtcatctgcctaatgttgtggcttttctc
ataagaaatgcttttgttgtttccacaatggctgctgtcgcattaggaattggcacgggc
tttgctttacgccacattaatatgtccgccaaggatgtaacatatttaacctttcctgga
gagctcctgatgagactcctgcagatgttggtgcttcctctcattatttctagtgtaatt
gcaggtctttcatctttggacaggatggcttttggggaaattgggctaaaggccttcagc
tattacatggtcaccacatgtatttctacattcactggcatcaccttagctgttctaatt
caaccagggaaatcctccaggactgcctcagtgtcctctagtggtaatacagaggatgtg
cagactgtggattcctttctagatataatcagaaacatgaatccctcaaatttggtggaa
gcttgtttcagaaagtacaaaaccgtttattccaggagtatgccggcgaccagtgacaac
aatgacacagtaccaggaccaggaacctcagacggactcaatattttgggtctactgttt
ttttctgtcgcctttggcctcatcttgagcagcatggggaatgaagcaaaacctctgagg
gatttttttgaatgcctgaataaagccattatgcatctggtcaacatggtcatctggtat
tccccagtggggctcttcttcctactggcgggacagattgtgaagatgaaagactccgga
gagataggtcttggagttgtcatgtacactctcactgtaataactggcctcctcatccac
agcctcctcacccttcccctcatctatttcattttcacacgaaagaatcccttcagattt
atgctcggtctactccaggctctcaccattgcctttgggacttcatcaagttctgcagcc
ttacctattaccctctcctgtatggaggaaaatcacaacatgaacaaacaagtgacacgc
ttcatgctccctattggggccacaatgaacatggatggtgcagcactctatgaagctgta
gctgctttattcattgcccagattcataatatggactttaacctgggtcaaatcattgcc
ctcagtttgattgtcacagttgcaagcacaggtgcagcgggcatcccacaggccggcatg
gtatccatgatccttgtgttggactccgttggattgcccactgaagatatatcactgctc
atgatagttgattggattctggatcgtctccggactaccaccaatgtgctaggtgactgt
gtcggtgtgggtgtagtccagcatctgtccaaaaaggagctgcagtgctgcagccctgca
gatacagattttgaggaggacagattccagatgtga
DBGET
integrated database retrieval system
