Pseudoliparis swirei (Mariana hadal snailfish): 130197617
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Entry
130197617 CDS
T09868
Name
(RefSeq) choline transporter-like protein 5-A
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130197617
04147 Exosome [BR:
pswi04147
]
130197617
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
130197617
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
130197617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
RVT_1
QCR10
Motif
Other DBs
NCBI-GeneID:
130197617
NCBI-ProteinID:
XP_056276345
LinkDB
All DBs
Position
8:complement(23107306..23168541)
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AA seq
982 aa
AA seq
DB search
MSSNQSPPQGPAPPHSNHVTSPELADSGLQPGGQHRLFTATRSLEGTWSLEGTLSLEGTL
SPEGTQSLEGTLSLEGTLSLEGTLSLEGTRSLDEAGEPAPCRGTHSLNNGPRHGARAQEQ
PARHTLAPPAGAASLPRPFVRGPQRAHRSARHGAPPLRAERLGRAERGGRRSSGPRPRRT
TPVRSFLQRSSPQKVRRQLEKLHQRRAEGPDGVSPRVLKTCATQLSGVLQRLFNLSLRLG
EVPVLWKTSCLVPVPKKSTPSGLNDYRPVALTSHVMKVLERLVLAHLRPQVKSSLDPLQF
AYQPHVGVDDAIIYLLQRAQSHLDGTGVSVRVTFFDFSSAFNTIQPLLLSEKKKPILFYF
NILKCANPAILINLQCPTTQVCVSACPDRFSTFTDMQLQHKLGQKNSWKNYRGFCQPGFN
EPDKPVSQVLRDEDCPSVIVPSRPFLQRCLPDVIRLNGSVTVANRSFKDALETTRRVTEL
HHAARGVSGLVDTTELGVKIVEDLANSWPWILVGLLIAMAISLLFILLLRFTAGLLLWTT
IVAVVLLLAYGMWLCSAELSRLRLRPGSDVAIVEVGLQTDLQVYLQLSQTWILLLASLGA
AEAAILLMLIFLRQRVRVAIAVLTEASKAVAHVTSTLLFPVLTFLLLSLCASYWAVTAVY
LASSGEAVYKVVSPEAGCPHGNSTCNPETFNRTSVSLSAPCLGSRCRFWFYGGESWFQRH
LFLLQLSNLLAFLWLLNFLRALEQCAVAGAFASYYWARRRPGAVPPWPLSASLGRAVRYH
TGSLAFGALILSVAQLVRIVLEYLEQKLRGLDSGPARFLMRCLQCCFWCLEKFLRYMNRN
AYIMVAIYGKNFCTSAREAFFLLMRNVVRVAVLDRVTDFLLFLGKVLIAGGVGAIAYLFF
TRKIPVVQEEVPNLNYYWVPLLAVVGGAYLIAHGLLSVYAVCVDTLFLCFCDDLERHDGS
PEKPFLMSPELHRILGKSSESR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaatcagagcccaccacagggtcccgcccctccacactcaaaccacgtgacc
tcccctgagctggccgactcagggctgcagcccgggggacaacaccggttatttacagcg
acccggagcctggagggaacctggagcctggagggaaccctgagcctggagggaaccctg
agcccggagggaacccagagcctggagggaaccctgagcctggagggaaccctgagcctg
gagggaaccctgagcctggagggaacccggagcctggatgaggcaggagaacccgcccca
tgcagggggactcacagtctgaacaacggcccgcgccacggggcgcgcgcgcaggagcag
ccggccaggcacactttggctcccccggccggtgctgcttctctcccgcgtccctttgtc
cgcggaccgcagcgcgcgcaccgcagcgcgcgccatggcgccccgccgctacgcgccgag
cggctcggccgtgcggagcgaggcggccgccggagctccgggccgcggccacggagaacc
acaccagttcgatccttccttcagaggtccagtcctcagaaggtgagaagacagctggag
aaactacaccagcgcagggcggaaggtcctgatggcgtcagccccagggtcctaaagacc
tgcgccacccagctgtctggtgtcctgcagcgcctcttcaacctcagcctgaggctgggg
gaagtcccggtgctgtggaagacgtcgtgcctggtccctgtccccaagaagtcaacacca
tctggcctcaacgactaccgaccggtcgccctcacctcccatgtgatgaaggtgctggag
aggctggtcttggcccacctccggccgcaggtgaaatcgtcgctggaccctctgcaattt
gcttaccagcctcatgtgggagtggacgacgccatcatctacctgctgcaacgagctcag
tcgcacctggatggaaccggtgtctctgtgagagtcactttctttgacttctccagtgca
tttaacaccatccagccactgctgctgagtgagaagaagaaaccgatcctcttctatttc
aacatcttgaaatgtgccaacccagcgatcctcatcaacctgcagtgccccacgacccag
gtgtgtgtgtcggcgtgtccggaccggttctccacgttcaccgacatgcagctgcaacac
aaactgggccagaagaactcctggaagaactacagagggttctgccagccgggcttcaac
gagccggacaagccggtgtctcaggttctccgggatgaggactgcccctccgtgattgta
cccagtagaccatttctccagcggtgtctcccagacgtcatcaggctcaacggctcggtg
acggttgcgaacagaagcttcaaagacgctctggagacgactcgccgtgtcacggagctc
caccacgcagccaggggtgtcagcggactagtggacaccacggagctgggcgtgaagatc
gtggaggatttggccaactcatggccgtggatactcgtaggcctgctcatcgccatggcg
atcagcctgctcttcatcctgctgctgaggttcacggccggtctgctgctgtggacgacc
atcgtcgccgtcgtgctgctgctggcctacggtatgtggttgtgctccgccgagttgagc
cggctgagactccgacccggctccgacgtggccatcgtggaggtgggcctgcagaccgac
ctgcaggtctacctgcagctctctcagacgtggatcctgctgctggcgtccttgggggcg
gcggaggcggccatcttgttgatgttgatcttcttgaggcaaagggtgcgagtggccatc
gccgtgctcaccgaggccagcaaggccgtcgctcacgtcacgtccaccctcctcttcccc
gtcctcaccttcctcctgctgagcctgtgcgcctcctactgggcggtgactgccgtctac
ctggcgtcctcgggggaggccgtctataaggtcgtgtctccggaggccggctgtccccat
ggcaacagcacttgcaacccagagaccttcaacagaaccagcgtgtccctctcggcgccg
tgtctgggctctcggtgccgcttctggttctacggcggggagtcgtggttccagcgccac
ctcttcctgctgcagctgtccaacctgctggcgttcctctggctgctgaacttcctgcgg
gccctggagcagtgcgccgtggccggggccttcgccagctactactgggcccggaggagg
cccggcgccgtgccgccgtggccgctgtctgcgtcgctcggcagggccgtcaggtaccac
acagggtctttggcatttggagctctgattctttccgttgcccagctggtccggatcgtc
ctggagtacctggagcagaaactccgaggcctggacagcggcccggcccggttcctgatg
cgctgcctgcagtgttgcttctggtgcttggagaagttcctccgctacatgaaccggaac
gcctacatcatggtggcgatctatgggaagaacttctgcacctcggccagagaagccttc
ttcctgctgatgaggaacgtggtccgggtggcggttctggaccgagtgacggacttcctg
ttgtttctgggcaaagtgctgatagcaggaggagttggtgcgattgcatacctcttcttc
acaagaaagatccctgttgtccaggaggaagtgcccaacctcaactactactgggtcccc
ctgctggcggtggtgggcggggcttacctcatcgctcacggcctcctcagcgtctacgcc
gtgtgcgtcgacacgctgttcctctgcttctgcgacgacctggagagacacgacggtagt
ccggagaagccgttcctcatgtcccccgagctgcacagaattctgggtaaatccagtgag
tcgcgttga
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