Pseudoliparis swirei (Mariana hadal snailfish): 130197634
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Entry
130197634 CDS
T09868
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130197634
04020 Calcium signaling pathway
130197634
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130197634
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130197634
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130197634
NCBI-ProteinID:
XP_056276374
LinkDB
All DBs
Position
8:complement(5018939..5072117)
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AA seq
2160 aa
AA seq
DB search
MALYNPVPHRQNCLTVNRSLFIFAEDNFIRKTARRFIETPFEYMILATITANCVVLALEQ
HLPGEDKTPMAKRLEKTEPYFIGTFCFEAGIKLVALGFVLHKGSYLRNGWNVIDFIVVLS
GIMATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMIPLLQIGLLLFF
AILMFAIIGLEFYSGKLHQTCLPSDVILDNETVDSSELAFACGVRKCPESYDCNDTWIGP
NDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGMTWNWMYFIPLIIIGSFFVLNL
VLGVLSGEFAKERERVENRRAFMKLRRQQQVERDLNGYRAWIDRAEEVMLAEENKSSGRS
PLDVLKRASKKKTGARRGAPGDEKYTDTSTANMSRSRMNFRSGRRGPAAYMRRKERMLRI
SIRRMVKTDTFYLMVLSLVALNTICVAIVHHNQPDWLTVFLYYAEFVFLGLFLAEMFLKM
YGLGFRLYFHSSFNCFDCGVIVGSIIEVVWSFFRPGMSFGISVLRALRLLRIFKITKYWA
SLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAVM
TVFQILTGEDWNEVMYDGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLAN
AQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRPNFPEEPDDKMAAA
DEPPPKGPNAFVSRRERRRKVHMSVWEQRANQLRKRRQMASREELIASPPEDGAETPALG
PEGGPAHPPESSAAGGAPLSEASTSVAVPIPEGTEPLVNLSEEKPGGGANHRALCRGRHR
MARKFRPGQGPDDGGARHRRHRHRDARAEAKSLDYAESPHEAPLVRRSHSQEREEEEREE
KDHKEEEKKKEEAEGGAAPEDGGAGIVNPYAEVGDDCQRDIPDPPQCEQLLGDDHDVPAE
EGEFTARAAEPPSRSVSVRRDASNAAGSVSIEMSAQPLLELMLVTVNSREMEAYSSEQTD
KENEMEDYDNEEEEEEEEEPPIPPKLAAPDSMFIFKASNPIRRVCHYVVTMRYFEMTILL
VIVASSIALAAEDPVCTNSDRNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDM
WNILDFIVVVGALIAFALTNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTS
LKNVLNILIVYQLFMFIFAVIAVQLFKGKFFYCNDGSMNTQKECQGYYIDYGRDKKELKR
REWKRHEFHYDNVCWALLTLFTVSTGEGWPQVLQHSTDVTEESMGPSRGNSMEMSVFYVV
YFVVFPFFFVNIFVALIIITFQEQGDKMIQECSLEKNERACIDFTISAKPMTRYMPQNRQ
TFQYRLWHFVASPSFEYTVLVMIALNTVVLMMKYHSAPAAYDMVLKHLNSTFTVLFSIEC
ILKILAFGVVNYFRDTWNIFDFITVLGSISEIIVDLQSVNTINMSFLKLFRAARLIKLLR
QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDESHINQHNNFNT
FFSALMLLFRSATGESWQEIMLSCLSGRECEPDTSISPLTTSPDHEGGCGTDFAYCYFVS
FIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEFDRLACGRIHYTAMY
EMLTHMSPPLGLGKKCPAKIAYKRLVLMNMPVDEDMSVHFTSTLMSLIRTALDIKIARGG
EDRIALDSELQREISIVWPYLPQKNLDLLVPINKDTDMTVGKIYASMMIMDYFKLNKAKK
LRQQLEAQKSSLIFQRLDASALPEDILSDTTAPPMPAHSAVSALTRGGFVALNPISPQDL
FLPISSDADADAAEQQNPRSGSVKRSASSAAGQRVNGLWKEEDEEEEEEEEEEKSPERVY
RPRHKSYKAAVSRSEHWKQGDRERGRSKERCHLLSPDASRCNSEERSLQPSRSSSAERAR
AQDKQGNSSDSPVPSTSESSTPSARRPGSQTRSRPHISYSPLHPSVGGDDDDKQGGGGAK
TARRGGKPNRKSQEGAAAAAGARRRDADREPSPPRRYPSEPFLAPQEGEHSPDPSGPVET
LTFEAAMACSLGRSNTVSSGHPRLRSGWQVPNGHVRKRLAQTTSVTGCDALSDTEEDDRC
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtacaaccccgtcccccaccggcagaactgcctcaccgtcaacaggtcgctc
ttcatcttcgcagaggacaacttcatcaggaagaccgcgaggcggttcatcgagacacct
tttgagtacatgatcctggccaccatcaccgccaactgcgtggtcctggccctggagcag
cacctccccggagaggataagacccccatggccaagagactggagaagacggagccgtac
ttcatcgggaccttctgcttcgaggcgggcatcaagctggtggccctgggcttcgtttta
cacaaaggctcctacctgaggaacggctggaacgtcatagacttcatcgtggtgctcagc
gggatcatggccactgccggcgcccacatgaacatcccagtggacctccggaccctgagg
gcggtgcgagtgctgaggcctctcaaactcgtctccggaatccccagtctgcagattgtg
ctgaagtccatcatgaaggccatgatcccgctgctccagatcggcctcctcttgttcttc
gccatcctcatgttcgccatcatcggtctggagttctacagcgggaagcttcaccagacc
tgcctgccgtccgacgtcatcctcgacaacgagaccgtggactcgtccgagttggcgttc
gcctgcggcgtgaggaagtgcccggagagctacgactgcaacgacacgtggatcggaccc
aacgacggcatcacgcagttcgacaacatcctgttcgccgtgctcaccgtgttccagtgc
atcaccatggagggctggacggccgtgctctacaacaccaacgacgccttgggaatgacg
tggaactggatgtacttcatcccgctcatcatcatcggctcgttcttcgtgctgaacctg
gtgttgggagtcctgtcgggagaatttgccaaagagagggagcgggtggagaacaggcgg
gccttcatgaagctccgccggcagcagcaggtggagagagacctgaacggctaccgggcc
tggatagacagggcagaggaggtaatgctggcggaggagaataaaagttctgggagatcc
ccgttagatgtgctgaagagagcgagcaagaagaagaccggcgcccgccgaggagcgccg
ggggacgagaagtacacggacacgtccaccgccaacatgtcgcggtcgaggatgaacttc
cgcagcggccggcgaggccccgccgcctacatgcgtcggaaggagcgcatgctgcgcatc
tccatccgccgcatggtgaagacagacaccttctacctgatggtgctcagcctggtggcc
ctcaacaccatctgcgtggccatcgtccaccacaaccagcccgactggctgaccgtcttc
ctctactatgcagagtttgttttcctggggctgtttttggctgagatgtttttgaaaatg
tacggtctgggcttccggctctacttccactcatctttcaactgcttcgactgcggggtc
atcgtcggcagcatcatcgaggtggtttggagcttcttcaggcccggcatgtcctttggg
atcagcgtcctgagggccctgagacttttgaggattttcaaaatcactaaatactgggcc
tctctcaggaacctggttgtgtccctcatgagctccatgaagtccatcatcagcctgctg
tttctcctcttcctcttcatcgtggtgttcgctctgctgggcatgcagctgtttggagga
aggtttatctttgaagattacactcccaccaactttgacacgtttccagctgccgtcatg
accgtgttccagattctgactggggaggactggaacgaggtgatgtacgacgggatccgc
tcgcagggcggcgtgcagtacggcatgtggtcgtccatctacttcatcgtgctcaccttg
ttcggaaactacaccctgctgaacgtctttctggccatcgctgtggacaacctggccaac
gcacaggagctgacgaaggacgaagaggaggaggaggagttcttcaaccagagatatgcc
agaggcagagacggcctgatatctgacgggaggaggaggccctacctgtacaggaaacga
gccatccaccgaggccggcccaacttcccggaggagcccgatgacaagatggcggccgcg
gacgaaccgccgcccaagggccccaacgccttcgtcagccggcgcgagaggaggaggaag
gtgcacatgtcggtgtgggagcagagagccaaccagctgcgcaaacgccggcagatggcc
agcagagaggagctgatcgccagccctccggaggacggcgccgaaactcccgccctcggc
ccggagggcggcccggctcacccgccggagtcctccgcggccgggggggcccccctctcc
gaggcctcgacttcggtcgccgtccccatccccgaggggaccgagcctctggtgaacctg
agcgaggagaaaccgggaggaggagccaaccaccgggccctgtgcaggggccgccacagg
atggcccgcaagttcagaccgggtcaggggccggacgacggaggggcccgacacaggcgg
caccggcaccgcgacgcccgcgccgaagccaagagtctggactacgcggagtcgccgcac
gaggcgccgctcgtcaggcggtcgcacagccaggagagggaggaggaggagagggaggag
aaggaccacaaagaggaggagaagaagaaagaggaggcggaaggaggagcagcgccagag
gacggcggagcgggcatcgtcaacccgtatgcagaagtaggggacgactgtcaaagagac
atccccgaccctcctcagtgtgagcagctgctgggggacgaccacgacgtcccggcggag
gaaggggagttcaccgcgagggccgcggagcctccgagccgctccgtctccgtccgacga
gacgcgtccaacgcggcgggaagcgtgtccatcgagatgtccgcgcagccgctgctggag
ctcatgctcgtgacagtgaacagtcgagagatggaggcatacagctccgaacagacagac
aaagagaacgagatggaggattacgacaatgaggaggaggaggaggaggaggaggaacct
ccaattcctcccaaactcgccgctccggatagcatgttcatctttaaagcctccaacccc
atcaggagggtctgccactacgtggtcacgatgcgctactttgagatgaccatcctcctc
gtgatcgtggcgagcagcatcgctctggctgccgaggaccccgtgtgcaccaattcagac
agaaacaaggtgcttcgttattttgattacgtcttcaccggagtgttcacctttgagatg
atcatcaagatgatcgaccagggtctcattctgcacgacggctcttatttccgagacatg
tggaacatcctcgacttcatcgtggtggtgggagctctgattgccttcgccctgacaaac
aacaaaggcagagacatcaagaccataaagtccctcagggttttgagggttcttcggcct
cttaaaaccatcaagaggcttcctaaactcaaggcggttttcgactgcgtggtcacgtcc
ctgaagaatgtcctcaacatcctcatcgtgtaccagctcttcatgttcatattcgctgtc
atcgccgtgcagctcttcaaggggaagttcttctactgcaacgacggctccatgaatacg
cagaaggaatgccaaggctactacatcgactacggccgcgacaagaaggagctgaagagg
agggagtggaagagacacgagtttcactacgacaacgtctgctgggccctcctcacgctg
ttcaccgtctccaccggagagggctggcctcaggtcctgcagcactccaccgacgtgacg
gaggagagcatggggccgagtcggggcaacagcatggagatgtccgtcttctacgtggtc
tactttgtggtctttccgttcttcttcgtcaacatcttcgtggctctcatcatcatcacg
ttccaggagcagggggacaagatgatccaggagtgcagtctggagaagaacgagagggct
tgcatcgacttcaccatcagcgccaagccgatgacccggtacatgccccagaaccggcag
accttccagtaccgactgtggcacttcgtggcgtcgccctccttcgagtacacggtgctc
gtcatgatcgcgctcaacaccgtggtgctcatgatgaagtaccactcggccccggccgcc
tacgacatggtcctgaaacacctcaactcgaccttcaccgtcctcttctccatagagtgc
atcctcaagatcctggcatttggtgtggtgaactactttcgagacacttggaacatcttt
gatttcatcaccgtccttggcagcatcagcgagataattgtggatttacagtccgtgaac
accatcaacatgagtttcttgaagctcttccgagctgccaggctcatcaagctgctgagg
cagggctacaccatccggatcctgctctggaccttcgtccaatcgttcaaggctcttccg
tacgtctgtctcctcatcgccatgcttttcttcatatacgccatcattggaatgcaggtg
tttggaaacatcaagctgaacgacgagagtcacatcaaccagcacaacaacttcaatacc
ttcttcagcgcgctcatgctcctcttcaggagcgccaccggggagtcgtggcaggagatc
atgctctcctgcctgtcgggtcgggagtgtgagccggacacctccatctcgcccctcacc
acgtctccggaccacgagggaggctgcgggacggacttcgcgtactgctacttcgtctcc
ttcatcttcttcagctccttcctgatgctaaatctgttcgtggccgtgatcatggacaac
tttgagtacctgacgcgagactcctccatcctgggaccccatcacctggacgagttcgtt
cgcatctggggggagtttgatcgcctggcgtgcggacgtatccactacaccgccatgtat
gagatgttgacgcacatgtcgccgcccctgggcctgggcaagaaatgtcccgcgaagatc
gcctacaagaggttggtgttgatgaacatgcccgtggatgaagacatgtccgtccacttc
acctccaccctgatgtcgctcatccgcacggcgttggacatcaaaatagccagaggcggc
gaggaccgcatcgctctggacagtgagctccagagagagatcagtatcgtttggccttat
ctgccccagaagaacttggacctcctggtaccgatcaacaaagacacggacatgacggtg
gggaagatctacgcctccatgatgataatggactacttcaaactcaacaaggccaagaaa
ctacggcaacaacttgaagctcagaagagtagcttgattttccagcgtctggatgcctcc
gcgctgccggaggacatcctgtccgacaccaccgcgccgccgatgccggcccacagcgcc
gtctcggccctgaccagaggaggcttcgtggctctcaaccccatctcacctcaggacctg
tttctgcccatcagctccgacgccgacgccgacgccgccgagcagcagaatccgcgctcg
ggctccgtgaagcgctcggcctccagcgcggcaggtcagcgggtgaacggtctgtggaag
gaggaggatgaggaggaggaggaggaggaagaggaagagaaaagtccggagagagtttat
cgacctcgtcacaaaagctacaaggccgccgtgtcccgctcggagcactggaagcagggc
gacagggagcgcggccgatccaaggagcgctgccacctcctttctccggacgcctctcgc
tgcaactcagaagaaagaagtttgcagccctctcgatcttcgagcgccgagagagcgcgc
gcccaagataagcagggcaacagctccgacagcccggtgccctccacctccgagtccagc
accccgagcgcccgacgacccggatcgcagacccgctctcgccctcacatctcctactcc
ccgctgcacccctccgtcggcggcgacgacgacgacaaacagggcggcggcggcgcgaag
accgcgaggcgggggggcaagcccaacaggaagagccaggagggggcggcggcggcggcg
ggcgcgaggcggcgcgacgcagaccgagagccgtccccgccccgacgctacccctccgag
ccgttcctggccccgcaagagggcgaacacagcccggacccctccggccccgtggagacg
ttgaccttcgaggcggcgatggcgtgcagcctggggcgctcgaacaccgtcagctcggga
cacccgcgcctgcggagcggctggcaggtccccaacggacacgttcgtaagcggctggcg
cagaccacctcggtcacgggctgcgacgctctcagtgacacggaggaggacgaccgttgc
tag
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