Pseudoliparis swirei (Mariana hadal snailfish): 130197643
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Entry
130197643 CDS
T09868
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130197643 (pif1)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130197643 (pif1)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130197643 (pif1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130197643 (pif1)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130197643 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
AAA_30
Pif1_2B_dom
AAA_19
Herpes_Helicase
AAA_22
Mg_chelatase
UvrD_C_2
DEAD
AAA_7
RsgA_GTPase
ABC_tran
AAA_16
PhoH
AAA_5
Motif
Other DBs
NCBI-GeneID:
130197643
NCBI-ProteinID:
XP_056276387
LinkDB
All DBs
Position
8:complement(11571309..11578522)
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AA seq
627 aa
AA seq
DB search
MLDREDCAQLQCCVTVEHLNACGQATRRQVIRKASVILGRNEFQDIILRVHDAKVPQNYH
LKEFKLFTKFVREGKCTVKLLPENIQLLFSNCPPDRLNLFLKTLSIKHQARMSSKPMTDR
EKLKAGLPRSFEAISPLQQKDIQKVNELRSTEAPRGLTDRTNRTTAAGRGQQVKRSRSDT
NFSPVKNNPSKKPILSLPSRKLNKEQAAVLTAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEVSMVEAQFFDKLESVARSVRRSTQPFGGIQLIICGDFLQLPPISKGKEKASFCFQARS
WRKVIQVNMELMEVWRQTDQSFISLLQAVRVGRVTEEITAKLKNSAYQPIERDGILATRL
CTHKDDVELTNENKLQQLPGSVRVFEALDSDPALGKTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGLVVAFEPGKHGLPRVRFLCGVTEVLKAERWVFKSCGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRADP
DVLIFYKKLRKERLLMQASMDDFIGND
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccgggaggactgtgcccagctgcagtgctgtgtgacggtggagcacctgaac
gcctgcggccaggccacccggaggcaggtcatccggaaagcctcggtgattctgggccgg
aatgagttccaggacattatcctccgggtccacgacgctaaagtcccgcaaaattaccat
ctcaaagaattcaagctttttacaaagttcgtcagagaagggaagtgcaccgtcaaactg
ctccccgaaaacatccagttgctcttctccaactgcccccctgaccggctgaacctcttc
ctaaaaaccctgagcatcaagcaccaggcccggatgagcagcaagccgatgaccgaccga
gagaagctcaaagccggcctgccccgcagcttcgaggccatcagcccgctgcagcaaaag
gatatccagaaggtcaatgagctgaggagtacagaggcgcccagagggctgaccgaccgc
accaacaggaccaccgccgctggaagaggacagcaggtcaaaaggtcgagaagtgacact
aacttcagcccagtgaaaaacaacccgagcaagaagcccatcctgtctctgccatcccgt
aagctgaataaagaacaggccgctgtcctgactgctgtgctaagtggcaagaacgtcttc
tttactggaagtgcaggtacaggaaaatccttcttactgaagagaatcatggggtctctt
cctccaaaaagcacctttgccacagccagcacaggagtggctgcatgtcacatcggagga
acaacattacacaactttgctggtattggctccggctctgccccgctggagcagtgtatc
gagctggcccagaggcccggggtgctgcagcactggaccagctgtcgacacctcatcatc
gatgaggtgtccatggtggaggcccagttctttgataagctcgagtcggtggcaaggtcg
gtgaggaggtccactcagccgtttgggggcattcaactaatcatatgtggcgacttcctc
cagctgcctccgatttctaaaggaaaggaaaaggccagcttctgcttccaggccagaagt
tggcgtaaggtcatccaggtcaacatggagctaatggaggtgtggaggcaaactgaccag
tccttcatctccctcttacaggcagtgagggtgggcagggtgacggaggaaatcacagcg
aagctgaagaacagcgcctaccagcccattgagagagacggcattctagcgaccaggctg
tgcacgcacaaggacgatgtggagctcacaaacgagaacaaactccagcagctgccaggg
tcagtgcgtgtgtttgaggccctggacagcgacccagccctggggaaaacgatcgacgct
cacagccccgtcagcagactgatccaactcaaagttggagcgcaggtcatgctgactaag
aacctggatgttgctcgaggtctggtgaacggagcgcgaggcctcgtggtggcttttgag
cccggaaaacatggactcccacgtgtgcgtttcctttgtggtgtcacagaggtgctgaaa
gctgagcgctgggtatttaagtcttgcggtgggatccacctgagtcgacagcagctgcca
ctcaaactggcctgggccatctccatccacaagagccagggaatgacactcgactgtgtg
gaaatctctctggcgcgtgtgtttgagagcggtcaggcctacgtggccttgtctcgggct
cgaagcctggagggtctgcgggtgatggactttgacccccgtgtggtcagggcagatcca
gacgttctcatcttctacaagaaactaaggaaagagcggctgctcatgcaggcctccatg
gacgactttattggcaatgactaa
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