Pseudoliparis swirei (Mariana hadal snailfish): 130197668
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Entry
130197668 CDS
T09868
Symbol
agap3
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130197668 (agap3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130197668 (agap3)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130197668 (agap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
130197668
NCBI-ProteinID:
XP_056276429
LinkDB
All DBs
Position
8:5464124..5589354
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AA seq
1330 aa
AA seq
DB search
MLFLSGGTVDVTPRSSAVGPPGNAVYHVTPKETQGDAPVSPLGTGRVAHNLVENCPPGAE
VIRMVPMENSPRLGRARHELDRWPSLSRPGRAGRQREEVVEEENEEELEELAVEMKTDRF
LKQPCRSLGNPSQRERDVAESTAQTERRAGSSTLRSERLVLRGHGAAAAGHGSLPRAVLR
RSRRDEAPAGRRPVSMYGDSVKQQRDCQLEQERRLRRPRSVCMLAGPGPVPPETRSQQPF
TRAGIGESNQPNRSRKAELRAVDGLNTVVAQRPPAPPEVIPRVRQRSRMPRPVSMTVLEL
RKRGSDDEIDSQRSGSRTGIDAGGFLKGGFRWRLFGKASLDKSKESDGDRDAKSPPKSGK
SEAPKSALGSLRRSLSLRIRRTRPRDKATFGPEKELKENSRTRSAAEEVTMPPRPFSYLT
GRTLPTSSEQIEDGAVQYIHYHSRGKVKVMEVPLCPTKLSSKPVQEEPSLWQLIANRFRR
KEQPCGGKCESQPTQNKDVGQYPLEGNPKSQPVSIETPAGIDAHKGQDSFVNSQEWTLSR
SVPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGG
PPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISAANP
RVIDDSRARKLSNDLKRCTYYETCSTYGLNVERVFQDVAQKVVAMRKKQQLSIGPCKSLP
NSPSHSSVPAASIPSVHLNQAANGGGAFSDYSSSVPSTPSISQREMRIETIASSNTPTPV
RKQSKRRSNIFTSRKASEQAKSVDSKTDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYV
TLCDNGVLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVSAVAPTASPKTNGLSK
DRSTLQLGIGNTGAPHSNSSSSLQTGASLFGGSKDGMHQRSFSVSSADQWNEAINTSTSS
GAPNGMSDPASSFVGSATSPKLEPPPSPHANRKKHRRKKSTGITKPDGLSAGNEEHEDTF
EFVIVSLTGQTWNFEASTFEERELWVQAVESQIFASLQSCESIKNKSRLGSQSDAMTIQS
IRNVRGNSFCVDCDAPNPDWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELS
MVMTAIGNAMANSVWEGALEGYTKPGSDSTREEKERWIRAKYEQKLFLAESPESDMPLGQ
QLLRAVVEDDLRLVVVLLAHGTKEEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVD
VKSRDARGQTTLSYARRAGSQECADILLQHGCPNDTSSLTSVATPNMSRRNPNINNNNAQ
CELNRSISIM
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgctcttccttagcggtgggaccgtggatgtgaccccgaggagttcagccgtcggccca
ccggggaacgccgtttaccacgtcaccccgaaggaaacgcagggcgatgcgccggtgtcg
ccgctgggaacgggccgggtcgcccacaacctggttgagaattgcccgccgggagcagag
gtaatccggatggtgccaatggagaacagccccaggctgggcagggcacggcacgagctc
gacaggtggccgtccctgagccgcccgggtagagccgggaggcaaagagaggaggtagtc
gaggaggagaatgaggaggagctggaggagctggcggtagaaatgaagacggacaggttt
ttgaagcagccttgcaggtccttgggtaacccttcacagcgagaaagagacgtggcggag
tcgaccgctcagacggagcgacgcgctgggagctcaacgctgcgatccgagagactcgtc
ttgaggggacatggcgccgccgccgcgggccacggctctctgccccgggccgtgctgcga
aggtcgagacgggacgaagcgccggcgggtcggagaccggtgagcatgtatggcgactcg
gtcaagcagcaacgagattgtcaacttgaacaagaaaggcgtctgaggaggcccaggagc
gtgtgcatgctggcaggccccggcccggtcccgccggagacccggagccagcagcccttc
accagggcgggcatcggcgagagcaaccagcccaaccggagcaggaaggccgagctgagg
gccgtggatggcctcaatacggtggtcgctcagcggcctccggcgcccccggaggtgatc
cccagggtgcgccagaggagccggatgcccaggcccgtcagcatgacggtgctggagctg
cgaaagaggggctccgatgacgagatcgacagccagaggagcggcagccgcacgggcatc
gacgcggggggcttcctcaaagggggcttccgctggaggcttttcggcaaagcgtctctc
gataagagcaaggagagcgacggcgacagagatgcaaagtctcctcccaaatccggtaaa
tccgaagcgccaaaaagtgcactgggctctttgagaaggagcctcagcctgcgaatccgg
aggactcggccccgggacaaagcgacttttggacctgaaaaggaattaaaggagaactct
cggactagaagcgcggccgaggaggtcacgatgcccccacggcctttctcgtacctcacg
gggaggacgcttcccacgtccagcgagcagattgaggacggggccgtgcagtacattcat
taccacagcaggggaaaggtcaaggtcatggaggtacccctgtgtccaacgaaactgtcc
tccaaaccagttcaagaagagccgagcctgtggcagctcatagccaaccggttcaggagg
aaagagcagccgtgcggcggcaaatgtgaaagccagccgacccagaacaaagacgtcggc
caatatcccctggaagggaatcctaagtcacagccggtctccatagagactccggccggc
atcgacgcccacaaaggtcaagactccttcgtcaacagccaggaatggacattgagtcgg
tcagtgccggagctgaaagtgggcattgtgggaaatctgtccagcgggaagtctgctctg
gtccaccggtacctgacgggcacgtatgtgcaggaggagtctcctgaaggtggccggttc
aagaaggagatcgtggtggatggacagagctacctgcttctgatccgagatgaaggtggg
cctccagaactgcagttcgccgcctgggtggacgccgtggtgttcgtcttcagcctggag
gatgagatcagcttccagacggtctacaactacttcctgcgcctctccagctacaggaac
acggccgaggtccccatggtcctcgtgggaacacaagacgcaatcagcgccgccaacccc
agagtgatcgatgactcgcgggcccggaagctgtcgaacgacctgaagcgctgcacgtac
tacgagacctgctccacttacggcctgaacgtggagagagtcttccaggacgttgcccag
aaggtggtggccatgaggaaaaagcagcagctctccatcggtccatgcaaatctctcccc
aactctcccagccactcgtcagtgcccgccgcctccatcccctccgtccaccttaaccag
gcggccaatggcgggggtgcgttcagcgactactcctcctctgttccctccacccccagc
ataagtcagcgggagatgcgcatcgagaccatcgcctcctccaacacgcccacgcccgtc
cgcaagcagtcgaagcgccgctccaacattttcacatcacggaaagccagtgaacaagca
aagagcgttgacagtaaaacagacagcataggcagtgggcgggccatacctatcaaacag
ggaatcctcctgaagcgaagtggcaaatccctcaacaaggagtggaaaaagaaatacgtc
acactgtgtgataacggcgtcctcacttaccaccccagtttacacgactacatgcagaat
gtgcacgggaaggagatcgacctgctgaggaccacggtcaaggttcccgggaagcgaccc
ccccgagcggtgtccgccgtcgcccccacggcgagccccaagaccaacgggctgagcaag
gaccgcagcaccttgcagctgggcatcgggaacacaggcgcccctcactccaacagcagc
tcgtccctgcagacgggcgcgtcgttgttcggcggcagcaaagacggcatgcaccagcgc
tccttctccgtgtccagcgccgaccagtggaacgaagccatcaacaccagcacgagcagc
ggcgcccccaatgggatgagtgatcctgccagttcctttgtgggcagcgccacgagtccg
aagctcgagccgcctccttcgccccacgccaaccgcaagaaacacagacggaaaaagagc
acgggcatcacgaagccagacggcttgtccgccggcaacgaagagcacgaggacaccttc
gagttcgtcatcgtgtcgttgacgggtcagacgtggaacttcgaggcgtcgaccttcgag
gagagggaactgtgggtccaagcggtggagagccagatcttcgccagcctgcagtcttgc
gagagcataaagaacaagtctcgcctcggcagccagagcgacgcgatgaccattcagtcc
atacgcaacgtgagggggaacagcttctgcgtggactgcgatgcgcccaacccggactgg
gccagcctgaacctgggcgccctgatgtgcatcgagtgctccggcatccacagaaacctg
ggcacccacctgtctcgcgtccgctccctggacctggacgactggccggtggagctcagc
atggtgatgacggccatcggcaacgccatggccaacagcgtgtgggagggcgctctggag
ggctacaccaagccgggcagcgacagcaccagggaggagaaggagcgctggatccgagcc
aagtacgagcagaagctgttcctggcggagtcgcccgagtcggacatgcccctggggcag
cagctgcttcgggcggtggtggaggacgacctgaggctggtggtggtgctgctggcccac
ggcaccaaggaggaggtcaacgagacgtacggggacggagacggacgcaccgctctgcac
ctctcctgcgccatggccaacgtggtgatcacacagctgctcatctggtacggcgtggac
gtgaagagtcgtgacgctcgtggccagaccacgctgtcctacgcccggcgagccggcagc
caggagtgcgccgacatcttgcttcagcacggttgccccaacgacacgagcagcctgacg
tccgtggccacgcccaacatgagccgccgcaaccccaacatcaacaacaacaacgcccag
tgcgagctcaaccgcagcatcagcatcatgtag
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