Pseudoliparis swirei (Mariana hadal snailfish): 130197684
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Entry
130197684 CDS
T09868
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145
Phagosome
pswi04814
Motor proteins
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130197684
09142 Cell motility
04814 Motor proteins
130197684
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130197684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130197684
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130197684
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
130197684
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130197684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
130197684
NCBI-ProteinID:
XP_056276465
LinkDB
All DBs
Position
8:12517841..12526582
Genome browser
AA seq
650 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDAKRGAEAGGSSGGHEDSDLERK
RREAEVLLQSVGINPDIHHAQPLRVVTGDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDG
NAGPRTLHWDPDPSTLQLHSDSELMGRGAVRLGMSKLTQVDFAPKELVSYCKETQTATEA
LTHTDQKADEEEDEEITARPIGEDAQEEKDEHGEQQEEDTAKELTEEEKLQVLHSEDFLS
FFERGSRIVERALAERVDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTC
LDWSPQYAELLVASYNNNEDAPHEPDGVALVWNLKYKKDTPEYIFHCQSEVMSAGFAKFH
PNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTD
GKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPVGDVNNFVVGSEDGSVYTACRHGS
KAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSC
DYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVCVEGAPALNRVRWAQSGKE
IATGDSEGQVQVYDVGEQICVPKADEWTRFVRTLAEINESRDEAEELANV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggctgaactggagaggaagaagcaacggatcgcgcag
atccgagaggagaagaagagaaaagaggaggagaagaaaaagaaggatggagacgcaaag
cgaggagctgaggcgggagggtcctcaggtggtcatgaagactctgacctggagaggaag
aggagggaggcggaggtgctgctgcagagtgtcggcatcaaccccgacatacaccacgct
cagcccctgagggtagtaacaggagatacatgtctgtttcactacctagtccctgccccc
atgtctccctccaacaaatcagtgggcagcgatgcaggaagccaagattctggggatgga
aacgcaggaccaaggacattgcattgggatcctgacccctctactctgcaactgcactcc
gactctgagctgatgggacgtggagccgtgaggctgggcatgtccaaattgacccaagtg
gactttgccccgaaggaattagtgtcctattgcaaagaaacacagacagccacggaggca
ctgacgcacaccgatcagaaagcagatgaggaagaggatgaggagataactgctcgccca
attggagaggatgcccaggaggagaaagatgaacatggcgaacagcaagaagaggacact
gccaaagagctgacagaagaagagaagctgcaggtcctgcactccgaggacttcctgtca
ttcttcgagcgaggcagcagaattgtggagagagctctcgctgagcgtgtggacgtctgc
ttcgactacagcggcagagatctagaggacaaggaaggtgatttgcaagccggtgcaaaa
ctggttctcaaccgacagtttgcagatgagcgctggactaaaaacagagtggtcacctgt
ctcgactggtcacctcagtatgcagagctgctggtggcctcgtataacaacaatgaggat
gctccccatgagcctgatggagtggcactggtctggaacctgaagtacaagaaggacaca
cccgagtacatcttccactgccagtcagaggtgatgtcagctgggtttgcaaagttccac
cccaacctggtggtgggtgggacttactcgggacagattgtcttatgggacaacaggagc
aacaagcgcacccctgttcagagaactccgctgtctgcagctgcacacacacacccggtt
tactgtgtgaacgtggtcggaacccaaaatgctaacaacctgatcagcatttccaccgat
ggcaaaatgtgctcctggagcctcgacatgctctcccagccacaggacagtctggagctg
gtcttcaaacagagcaaagcggtggccgtcacctccatggcctttcctgtgggcgacgtg
aacaactttgtggtggggagcgaggacggctcggtctacacggcttgtcgccacgggagc
aaggcggggatcaccgaggtgtttgagggccatcatggtccggtgaccgggctgagctgc
cacagtgctggaggacctgtggacttctctcatctcttcatctcctcctcttttgactgg
actgtcaaactctggagcacgaagagcacacgtccattgtactcgttcgaggacagctgt
gactacgtctatgatgccatgtggtctccaacacacccggctctgtttgcctgtgtggac
ctggccggacggctggacctgtggaacctcaacaatgatacagaagttcccaccgccagt
gtgtgtgtggagggcgctccggcattgaaccgcgttagatgggctcaatctggtaaagag
attgccaccggggactccgaggggcaagtgcaggtctacgacgttggggagcaaatctgc
gtgccgaaggccgacgagtggacgcgcttcgtcaggacgctggctgagatcaatgagagc
cgagatgaagccgaggaactggccaacgtctga
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