Pseudoliparis swirei (Mariana hadal snailfish): 130197691
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Entry
130197691 CDS
T09868
Symbol
cpdp
Name
(RefSeq) LOW QUALITY PROTEIN: CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130197691 (cpdp)
Enzymes [BR:
pswi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
130197691 (cpdp)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130197691 (cpdp)
Prokaryotic type
130197691 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
130197691
NCBI-ProteinID:
XP_056276488
LinkDB
All DBs
Position
8:10800370..10806228
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AA seq
543 aa
AA seq
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MLLCVWRSNQRPASVLSPLTKSLTGQLIMSDKKRKSTSAAAKGPSAKQRKVAPVKEEKNT
SAGGWLEGLLKQHRTDNKEMKFNKKRLRLLSDTDKIKQDSEGVLYWMLREHRGQDNWALV
HAQQLALKXKLPLHVCLPRGATVRLVVPQSELSTPRHYSFLLKGLDEVATECKALNIQFH
LLHGSAGDILPGFXSLGAVVTDFTPLREPLQWLEDVKKSLPEDIPLIQVDAHNIDPCWVA
SPKLEHAARTIRGKITKLXPEILTEFPLVERHAHTSTRTDKPVDWDSTLASLQVDRAVGD
XQPGTKRGMAMLESFIDVRLKLFDTNRNDPNTAALSQLSPWIRFGHLSAQRVAMQVQHSG
KSAGHSVASFIEELVVRRELTDNKKYDSVEGAYEWAQKSLKDHAKDKREYLSTREQLENA
TTHDKLERCSGYQMVTEGKMHGFLRMYWAKKILEWTTSPEEALSIALYLNDRYELDGQDP
MAFAGCMWSICGIHDRGWGERDVFGKIRYMNYKGCLRKFDVAGFERKYCPVHVWKDANTL
LMA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctgcgtttggaggagtaatcagagacccgcttcagttctctccccactgacc
aagtcactcacgggtcaactcatcatgtcggacaaaaagcgcaagtcaacgtctgctgct
gctaaagggccgagtgcgaagcagcggaaggtggctcccgtgaaggaggagaagaacacg
agcgctggaggctggctggaggggcttctgaagcagcacaggaccgacaacaaggagatg
aaattcaacaaaaagcgcctccgccttttatctgacacagataagataaaacaggactcc
gagggtgtcctgtactggatgctaagggaacacagaggacaagataattgggcgctggtt
catgcacagcagcttgctttgaagtagaagcttcctctgcacgtctgtctgcctcgtggt
gccacagtccgcctcgtggtgccacagtccgagctgtccaccccgagacattacagcttc
ttgctgaaaggtctggatgaagttgcaacggaatgcaaagccttaaacatccagttccac
ttacttcatggatcagcgggggacatcctccctggcttcnngtctctgggggccgtggtg
acagacttcacccccctcagagagccactgcagtggttggaggatgttaaaaagagtctt
ccagaggacattcccctcatacaggtcgatgcccacaatattgacccctgctgggtcgca
tcacctaagcttgagcatgccgccaggacgatcagagggaaaatcacaaagctgtagccg
gagatcctcaccgagtttcctctggtcgagagacacgcccacacatccacaaggactgac
aaaccagtagactgggactcaaccctggcctccctgcaggttgaccgagcagtaggagac
nnacagccaggcaccaagagagggatggccatgttggagtccttcattgatgtacgcctt
aaactgtttgacactaaccgcaacgacccaaacactgctgccctcagccagctgtccccc
tggatccgctttggccacctgtcagcccagcgtgtggcgatgcaagttcagcacagtggg
aagtctgcaggtcattctgtcgcctccttcatcgaggagctggttgtgcgcagagagctg
acggacaacaagaaatatgactccgtggagggtgcgtatgagtgggctcagaagagcttg
aaagatcatgccaaagacaaacgggagtacctctccacgcgggagcagctggagaacgcc
accacgcacgacaaactggaaaggtgctcaggctaccagatggtcactgaggggaagatg
catggtttcttgaggatgtactgggccaaaaagattctcgagtggacgacctcgccagag
gaggccctgtcaatcgctctgtacctaaacgatcgctacgagctggatggccaggacccc
atggcttttgcaggttgtatgtggtcgatttgtggcatccatgaccggggttggggagag
agagatgttttcggaaagatccgctacatgaactacaaaggctgcctgcggaagtttgat
gtagccggatttgagagaaaatactgtcctgtacatgtttggaaggatgcgaatacactg
ctgatggcctaa
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