Pseudoliparis swirei (Mariana hadal snailfish): 130197708
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Entry
130197708 CDS
T09868
Symbol
sema6ba
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba
KO
K06842
semaphorin 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
130197708
NCBI-ProteinID:
XP_056276517
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Position
8:13090097..13102504
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AA seq
894 aa
AA seq
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MATIAPPVTFILLLLQLAGGSFPEEPSPLSYIPVEVVRRYPVFLGRAHRSAQRQDLHVQT
VLQVNRTLYIGARDDLYRVELDNMAGDEMFYSKKRTWESNKNDIRVCRMKGKQEGECRNF
IKVLLSQHGGLFVCGTNAFNPLCANYTKDTLEMVGEPVSGMARCPYDPRHANVALFADGS
LFTGTVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSMEWGPHIYFFFREMAM
EFHHLEKVMVSRVARVCKADLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLLHATSK
IIHMQGRDVMLGLFSTPPNSIPGSAVCVFDMQQLAHVFEGRFKEQKSPESIWTPVPDDAV
PKPRPGGCAVQGSRYSSSNMLPDEVLNFVKTHPLMDETVPLLGHRPWVVKTMGRYQLTTM
VVDTEAGPHKNRTVLFLGSTRGTILKFLIIYSGDSVSHGSVFLEEVEGFNPEKCGEDSPP
ARQLLSLSLDRTSHTLLLAFPSCLVRMPTSRCHLHSRCMKSCLASRDPYCGWTRGSTCSF
LRPGTRLPFQQDVEYGNTTSHLGDCDGILQQSLLIEPESLVSLNLLVASAVSAFTIGAAL
SGLAVCWIMAHKPTNRRHGNTSQSSIQRRERGLLNNGADMGGSVLSVTRQGGGDRPCTQG
GETLFVMPNGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSNSGGWDTSQTYLGGGSVGL
GSPCRIPPSVYLTTRLFQQGGGGRHSGESRVNDMPRQHYVCLSRQEKGVKGTPKAPLRKS
AGEYVYPMTPQDSPERRRVVSAPSAPMGYGEPLPLRWPAPEGYILSSHGMVPVPQPPPTM
PVPSGQTYMSQQHPPGLSRALLRGALERGELGELVDLSQLMSKKNCSDRTQTGQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccattgctccacccgtcacatttattctcctgctgctccaactggcgggtggc
tcattcccagaggaacccagtccgctcagctacatccctgtagaggttgtgcggaggtat
ccagtgttcttgggccgagctcatcgttcagctcagagacaggatctgcacgtccagacg
gtcctccaagtcaaccgcacgctctacataggagccagagatgacttgtacagagtggaa
ttggataatatggcaggtgatgagatgttctacagcaagaaacgaacatgggaatccaat
aagaacgacattcgagtgtgccggatgaagggaaaacaagagggagagtgccgtaatttc
atcaaggtgttgctcagccagcatggtggcctgtttgtatgtgggacaaacgccttcaac
ccactgtgtgccaactacactaaagacactctagaaatggtgggagagcctgtcagtggg
atggcacgctgcccttatgatccgcgacatgccaatgtggctctatttgcagatggaagt
ctctttactggcactgtgacagacttcctggccatcgatgcggtgatctatcgtagcctc
ggcgacagccccgccctccgcacggtcaaacacgactccaaatggttcagagagccctac
tttgtgagctccatggagtgggggcctcatatttatttcttcttcagagagatggccatg
gagtttcaccatctagagaaggtgatggtctctcgtgtggctcgtgtgtgtaaagcagac
ctgggtggctctcagcgcgtcctcgagaaacagtggaccacatttctgaaggcgcgactc
aactgctccgtgccgggagattcacacttttacttcaacctcttgcacgccacaagcaaa
atcatccacatgcagggacgagacgtcatgctgggtctcttctccacgccacctaacagc
atccccggctctgccgtgtgtgtgtttgacatgcagcagctcgctcacgtctttgagggc
cggttcaaagagcagaaatcccccgagtctatttggactcccgtgccggacgatgcggtg
ccgaaaccgagaccaggagggtgtgcagtgcagggatccagatatagctcttccaacatg
ctgcctgatgaagtactgaactttgtgaagacccacccactgatggacgagaccgttcca
ctcctggggcacagaccttgggtggtcaagactatgggacggtaccagctgacaaccatg
gtggtggacactgaagctggtccccataagaaccgcaccgtcttgttcctgggctcgacc
cgaggaaccatcctgaagtttctgatcatttacagtggagattctgtctcccacggcagt
gtgtttctggaggaggtggaaggattcaacccagagaagtgtggggaggactctcctccg
gctcgtcagctcttgtctctgtcgttggaccggaccagtcacactctgctgctggccttc
ccctcctgtctggtccggatgcccacatctcgctgccacctccactcacgctgcatgaag
agttgtctcgcctccagggacccgtactgtggctggacccgaggcagcacctgctccttc
ctgagaccaggcacacggcttccttttcaacaagatgtggaatatggaaacaccacctcc
catctaggcgactgcgatggaattctgcagcagagtttgctgattgaaccggagagcttg
gtctccctcaacctgctggtggcgtctgctgtgtccgctttcaccatcggggcggcgctc
tctggcctcgccgtctgctggatcatggcccataaacctaccaaccgtcgccacggcaac
acctcccagtcctctatccagcggcgtgaaagaggcctgctgaataacggcgctgacatg
ggaggctccgtgctcagtgtgacacgacagggaggtggggaccgcccctgcactcagggc
ggggaaaccctgtttgtcatgcccaacggatgggtgaagtcaggagagctcgacccgggt
ttcctgccaaccccggagcacacgccccagcagaaacgcagaggcctacgactgtccgac
tccaactctggagggtgggacaccagccagacgtacctggggggcggctcagtcggtctg
ggctctccctgccgcattcccccctccgtctacctgaccaccagactctttcagcagggg
ggaggcgggagacacagtggtgagagccgggtaaatgatatgccacgccagcactacgtc
tgcctgagcaggcaagaaaaaggagtgaaggggacgcccaaagcccctctccggaaatcc
gcaggagaatatgtataccccatgaccccccaggactcgcctgagcgccggagggtggtt
tcagcccccagcgcccccatggggtatggcgagccgctgcctttgcgctggccggccccg
gaaggatacatcctaagcagccacggcatggtccccgtcccccaacctccacccaccatg
cccgttcccagtggccagacctacatgtcccagcaacacccccccgggctgagcagggct
ctgctgagaggggccctggagcgaggggagctgggcgagctggtggatctcagccagctg
atgagtaagaagaactgcagcgataggactcagactggccagtga
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