Pseudoliparis swirei (Mariana hadal snailfish): 130197711
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Entry
130197711 CDS
T09868
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130197711 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130197711 (rorcb)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130197711 (rorcb)
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130197711 (rorcb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130197711
NCBI-ProteinID:
XP_056276519
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Position
8:13125233..13139184
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYTCSRLRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGSAGGAATALSMP
NKDGVCGGGAEDREEGLSRSYSSGGSSSTLSDLDDIAALPDLFDLPLTPKESSEYCSLEL
HGGGASTGNTSNSSSASSSSSSLSNQNSPQQTMLDGANATGIHPSHTHSLTRPLLKRTQA
LLDHLPDDCSITDLERITQSILKSHLETCQHSAEDMKRFTWAQYTPEETRAFQNKAAEWM
WQQCAHHITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNNTI
FFNGKFALAQFFTALGCDDLVSAVFDLGKGLCRLQLSDEEMALFSAAVLLCPDRHWLTEG
QKIKNLQEKVYLALQHSLHKSGASDEKLDKLVSKLPMMKSICNLHVDKLEFFRLVHPETA
YSFPPLYREVFGSEMSLPDSTNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaggtcatcccctgtaagatctgtggggacaagtcctcaggaatc
cactatggagtcatcacctgcgaaggctgcaagggtttcttccgtcgcagccagcagaac
aacgcgatgtacacttgttcccgcctgaggaactgcctgatcgaccgaacgaaccggaac
cgctgccagcactgccgcctacagaagtgtctggctttgggcatgagcagagacgcggtc
aagtttggtcgtatgtccaagaagcagcgcgacagcctctacgctgaggtgcaaaagcac
caaaagtcccaggagtgcgtgggctccgcgggcggggccgccacggctctgtccatgcct
aataaagacggtgtctgtggcggtggagcggaggaccgtgaagagggtctgagccggtcc
tacagcagcgggggctccagctccaccctcagcgacctggatgacatcgcagcgctgcct
gacctgtttgacctgccgctgacccccaaggagtccagcgagtactgcagcctggagctg
cacggcggcggggccagcacggggaacacctccaactcgtcttctgcttcttcctcttca
tcatccttgtccaatcagaattccccacagcagacaatgctggacggggcaaacgccacc
gggatccacccctcgcatacacactcgctcacgcgtccgctgctgaaacgcacacaagca
ctgctggatcatctgcctgacgactgctccataacagaccttgagcgcataactcagagt
attctcaagtctcacttggagacgtgtcagcacagcgctgaggacatgaagagattcacc
tgggcacaatacacacctgaggaaacacgtgcttttcaaaacaaggcagctgagtggatg
tggcagcagtgtgcacaccacatcaccaatgccattcagtatgtggtggagtttgccaaa
cgcattgctggcttcatggacctgtgccagaatgatcagattatattgctgaaagcaggc
tgtctcgaggtcctgctgatccggatgtgccgagctttcaacgtcaacaacaacaccatt
ttcttcaatggaaagtttgccctggctcaattcttcacagcactcggttgtgatgacctg
gtcagtgcagtgttcgacctggggaaaggactctgccgtctacagctgtctgatgaagag
atggctctgttcagcgctgctgttcttctttgtccagatcggcactggctaacagaaggc
caaaagattaaaaacctccaggagaaggtctacctggctctgcagcacagtctacacaag
agtggagcttctgacgagaaactggacaagttggtgtccaagctgcccatgatgaagtct
atctgtaacctccatgtagataaacttgagtttttccgtttggtccacccagagaccgcc
tacagtttcccaccactgtaccgggaagtgtttggcagcgagatgtctctgccggactcc
accaacagctag
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