Pseudoliparis swirei (Mariana hadal snailfish): 130197719
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Entry
130197719 CDS
T09868
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130197719
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130197719
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130197719
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130197719
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130197719
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Type II RPTP family
130197719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
Ig_VEGFR-1-like_5th
PTPlike_phytase
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
130197719
NCBI-ProteinID:
XP_056276531
LinkDB
All DBs
Position
8:12983127..13056490
Genome browser
AA seq
1959 aa
AA seq
DB search
MPQSRTAGVPVQSRRPSLGIRPGPSPLGLLLLWITLLTSPLSSVCGAPAPPKFTKIPTDQ
IGVSGGVASFVCQASGHPKPVVYWNKKGKKVNSQRIETVEFDDGAGAVLRIQPLRAPRDE
NIYECVARNSEGEVSVTAKLAIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIP
DPEITWFKDFLPIDPVSSHGRIKQLRSGALQIENSEETDQGKYECVATNSQGVRYSSPAN
LYVRVRRVPPRFSILPSNHEIMPGGSVNITCVAVGSPMPYVKWMLGSEDLTPEDEMPIGR
NVLELNGVRESANYTCVAMSSLGIIEATAQVLVKTLPKPPGTPIVTETTATSVTITWDSG
NPDPVSYYIIQYRAKGPDSKYEMVDSITTTRYSIGGLYPNTEYEIRVSAFNSIGQGPPST
RVEARTGEQAPASPPRNVRAHIISQNTVMVRWEEPEEPNGQVKGYRVYYTMDPSRSMNEW
QIHNVQDSVITTIQSLVTSKTYTIQVLAFTSVGDGPFSDPVHVKVMPGVPGQPGKFKVGK
VTDTSIELTWEPAYTKEGIVNYELLYKPVKFGSLEKLTFGPRISYTVEGLKANTEYSFSL
AAISNKGIGAFTNELVQRTSQAKPSAAPEGVSCESASSTSLRVNWKPPRIEGQNGELAGY
ELRYLRVSGAEGGGQGQDVNGPPIPAQEGQTLLGGLEKWSWYNISVAAFNAEGAGPNSPV
VTCRTNEDVPGAAPREVDVKPLNSSALRVTWRSVLPRLRQGQVRGYQVHFSRAKRSDSRN
LPRIKDLLLDESQMEEADSTQYELILGDLKAETVYSISVAAYTTKGDGAHSKAKLVQTLG
IVPGPPSLWVRPGPGPSAVVRWAPPVECSESGSESRGAPVEIQGYRLQFGLKNTSLDTTV
DFTNKEKNFTVGNLSPGSSYVFALSAKSRAGFGDVVQHEITVPIFPPSGYPIIIDFINAT
CCSLQFSWLPPASEESNGVITEFTISYKEAAGPKPSADPGPSAIPAPTAPPWLIMSPASE
SSYTILGLNPSTAYEVQLRAHNKAGPGPYSPPLKGRTLAFETDVPRNFSVNLATKTSVLL
TWEFPESANPYRFTVEYNRQKMEVDARLRKAVIPNLQPDTSYDFKITAPEGNMGGLRHRI
SAKTSPPIVIRRAEIDHTRDTETTVTIILPSLESRSPVKNVYVVVVPLRRARGVIRHLKN
PDEMDLEELLKDISQKQRVSRQQKQVDLRRAYITARFTPATLPAFFTLGDQLDYGSFENR
ALEAGQEYVFFILAELNSTTGKMYVASPYTDPVIAPDSDPQPLDAGDGLIWVVGPVLAVV
FIICIVIAILLYKNSKPDRKRKDSEPGTKSLLSNAELMAHHPTDPVEMRRINFQTPGMMS
HPPIPISELSEHIELLKANDNLRLSQEYESIDPCQQFTWEHSNLEVNKPKNRYANVIAYD
HTRVVLAPIEGILGSDFINANYIDGYRKQNAYIATQGSLAETFGDFWRMVWEQRAASVVM
MTRLEEKSRIKCDQYWPSRGTETYGMIQVTLLDTMELATFCVRTLSLHKSGSSERREVRQ
FQFTAWPDHGVPEYPTPFLNFLRRVKACNPPDAGPITAHCSAGVGRTGCFIVIDAMLERI
RHERTVDIYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVACGNTEVAARSLHSYMQKLS
KVETGEHITGMELEFKRLANTKAHTSRFVTANLPCNKFKNRLVNIMPYENTRVCLQPIRG
LEGSDYINASYIDGYRQQRGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREIGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGV
PKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGAVDIF
QTVKMLRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAT
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaatccaggacagctggagttccagtccagtccaggaggccgagtctggggatc
cgccccggcccctctccgctgggcctgctgctgctctggatcaccctgttaaccagccct
ctgagtagtgtgtgtggagcaccagctcccccaaagttcaccaagattcccacagaccag
atcggagtgtcagggggtgtggcatcatttgtgtgccaggccagcggccatcctaagcct
gtcgtctactggaacaagaagggcaagaaggtcaactcccagcgtattgagactgtcgag
tttgatgacggtgcaggtgctgtgctgaggatccaaccactccgagcacctcgagatgag
aacatctatgagtgtgtggcacgcaacagtgaaggagaggtgtctgtcactgcaaagctg
gccattatcagagaggacctgttgccatttggcttccctagtatagacatgggtccccag
ctgaaggtggtggagaggacaaggacggccaccatgctgtgcgcagccagcggcattccc
gacccagagatcacctggttcaaagacttcctccctatcgaccccgtcagcagccatggt
cgcatcaaacagctccgatcaggagcgctacagattgagaacagcgaggaaacggaccaa
gggaagtacgagtgtgtggccaccaactctcaaggcgtgcgctactcctcccctgccaac
ctgtatgtgcgagtgcgccgtgtgcccccccgtttctccatcctcccttccaaccatgag
atcatgccaggagggagcgtcaacatcacctgcgtggccgtgggttcgcccatgccctac
gtcaagtggatgctgggaagtgaggacctgaccccagaggatgaaatgccgattggacgg
aacgtgctggagctcaacggcgtccgggagtccgcaaattacacctgtgtggccatgagc
agcctgggcatcattgaggccaccgctcaggtcttagtaaagactttgccgaagcctccc
ggcacacccattgtcacagagaccaccgctaccagtgtgaccatcacctgggactccggt
aacccagacccggtctcctactacatcatccagtacagagccaaagggccggacagcaag
tacgagatggtggacagcatcaccaccacccgctacagcatcgggggactgtaccccaac
accgagtacgaaatcagagtgtcagccttcaatagcatcggccagggccccccctctaca
cgcgtggaggcccgcacaggcgagcaggccccggccagcccgccccgaaacgtcagggcc
cacattatatcccagaacacagtgatggtccgctgggaggagccggaggaacccaatgga
caggtgaaaggctaccgtgtgtactacaccatggacccgtcccggtccatgaacgagtgg
cagatccataacgtccaggacagcgtgatcaccaccattcagagcctggtgacctccaag
acctacaccatccaggtcctagccttcacctctgtaggggacggacccttctcagacccc
gtccatgttaaagtcatgcctggagtcccgggccagccgggaaagtttaaagtcggtaag
gtgaccgacaccagcattgagctgacctgggaacccgcctacacaaaggagggcattgtc
aactatgagctgctctacaaacctgtcaagtttggcagcttggagaagctgacattcggg
ccgaggatttcttacacagtggaaggtctcaaagcgaacaccgagtactccttctccctg
gccgccatctcaaacaaaggcatcggcgctttcaccaacgagctggtgcagaggacgtca
caagccaagccctcagctgcccccgagggtgtgtcgtgcgagagtgccagctccacttcg
ctgagagtaaattggaagccgcctcgaatcgagggtcagaatggtgaattggcaggttat
gagctgagatacctgagagtttctggggctgaaggtggagggcagggccaggatgtgaat
gggcctcctatcccggcccaggaggggcagacattgttaggggggctggagaaatggagc
tggtacaacatcagcgtggcagccttcaatgcagagggggccggacccaacagccctgtg
gtgacctgcagaactaatgaggacgttcccggtgcagcccctcgtgaggtggatgtcaag
ccgctcaactcctcagcacttcgggtcacttggcggtcagtgttgccacggttacggcaa
ggccaggtccgtggctaccaagtgcatttcagccgtgcaaagcgcagtgactcacgaaac
cttccccggatcaaagacctcttattggatgagtcccagatggaggaggctgactcaact
caatatgagctgattttaggggatctgaaagcagagactgtgtactccatctcagtggca
gcgtacaccaccaaaggggatggagcgcacagcaaagccaaactggtgcagaccctgggg
attgtgcccggccccccctctctttgggtgcgtccaggacccggtccatcagcggtggtt
cggtgggctcctccggtggagtgctctgagtcaggctctgaaagccgaggggcccctgtg
gaaatccagggctaccgcctacagtttggcctgaagaatacctcattagacaccacagtg
gatttcacaaataaagaaaaaaacttcactgtcggaaacctttcccctggttcctcttac
gtctttgctctctccgcgaagagccgagcgggcttcggagacgtggtgcaacatgagata
acagttcccatcttcccaccctcgggataccccataattattgactttattaatgccacc
tgctgctccctccagttctcctggctgccccctgcctcagaggagagcaacggtgtcatc
acagagttcaccatatcttacaaagaggctgcaggccccaaaccctccgctgaccctggc
ccctcagccataccagcccccactgctcccccttggctgatcatgtcaccagcgagtgag
tccagctacaccatcctgggcctcaatcccagcacggcctacgaggtgcaactaagagcc
cacaacaaagcagggccaggcccctacagcccacctttgaagggccgaaccctggccttt
gaaacagatgtgccgaggaatttttcagtcaatctggccactaagaccagtgttcttctg
acctgggagtttccagagagcgccaacccctatcgctttactgtggagtataaccgacag
aagatggaggtggacgctcgtctgagaaaggcagtcatcccaaaccttcagcctgacacc
agctacgactttaagatcacggctccggagggaaacatgggaggccttcgccaccgcatc
tccgcaaagacctccccgccaatcgtcatccgccgcgccgagattgaccacacccgtgac
actgagaccacagtcaccatcatcctgccgtcgctggagtctcgctctcctgtcaagaat
gtgtatgttgttgtggttccgttgcggagagctcgcggcgttatcagacacctcaagaac
ccggatgaaatggaccttgaggagctgttgaaagacatcagtcaaaagcagagagtttct
cggcagcagaagcaggtggacctgcggcgggcttacatcacagcccgtttcacacctgcc
accttaccggcgttcttcaccctcggggaccagctggactacggaagctttgagaaccga
gctctcgaggcggggcaggagtacgtcttcttcatcctggccgagctcaactccaccacc
gggaagatgtacgtggccagcccctacacagaccccgtgatcgccccagattcagatccc
cagcccctcgatgcaggtgatggtctgatatgggtggttggacccgtcctggctgtggtc
ttcatcatctgcatcgtcatcgctatcctgctttacaaaaacagcaaacctgacaggaag
cgcaaggactctgaacccggaaccaagagccttttgagcaacgcagagctgatggcccac
cacccgacagaccctgtggagatgagacgcattaacttccagactcccggaatgatgagc
catcctcccatccccatcagtgagctgtctgagcacatagagctgctgaaagccaacgac
aacctgcgactctctcaggagtacgagtcgatcgacccctgtcagcagttcacctgggag
cattcaaacctggaggtcaataagcccaaaaaccgctacgctaacgtcatcgcctacgac
cacacgagagtcgtcctggctcccatcgaaggtatcctggggagcgacttcatcaacgcc
aactacatcgatggctacaggaagcagaatgcctacatcgcgacgcaggggtccctggcg
gagacgttcggggacttttggaggatggtgtgggagcagcgggccgcctctgtggtcatg
atgacgcgcctggaggagaagtcacggataaagtgtgaccagtactggccaagtcgcggc
acagagacatacgggatgatccaggtcactcttctggacacaatggagctcgccacgttc
tgtgtccgcacactttctctgcataagagtggcagcagtgagcggcgagaggtgcgtcag
ttccagtttacagcttggccggatcacggagtgccagagtacccgacccccttcctcaac
ttcctccgcagggtcaaagcctgcaatcctcctgacgccggaccgatcaccgctcactgc
agtgctggtgttggtcgcactggctgtttcattgtcattgacgccatgctggagcgcatt
cgacacgagcgcactgtggacatctacggtcacgtgaccctgatgcgctcacagaggaac
tacatggtgcagacggaggaccagtacagcttcatccacgaggccctgctggaggctgtg
gcctgcgggaacaccgaggtggccgcccggagtctgcactcctacatgcagaagctgtcc
aaggtggagactggggagcacatcaccggcatggagctggagttcaagcggctggcgaac
accaaagcccacacgtcccggtttgtcacagccaacctgccttgcaacaaattcaagaac
cgactggtcaacatcatgccctacgaaaacacccgcgtctgcctccagccaatcagaggc
ctggagggctccgactacatcaacgccagttacatagacggatacaggcagcagagaggc
tacattgccacgcagggcccgctggctgagacgacggaggatttctggaggatgctgtgg
gaacacaactccactatagtggtcatgctcactaaactgagagaaataggccgggagaag
tgtcaccagtactggcccgctgagcgctccgccaggtatcagtacttcgtggtggacccc
atggctgagtacaacatgcctcagtacatcctccgggagttcaaagttacggatgccaga
gatggccaatcacggacagtgcgtcagttccagttcactgattggccagagcaaggtgtg
cccaaatctggggagggcttcatcgatttcattggccaagtccacaaaaccaaggagcag
ttcggccaggatggaccgatcagcgttcactgcagtgctggcgtggggcggacaggggtc
ttcatcactctgagtattgtcctggagaggatgcgttacgaaggggccgtggacatcttc
cagaccgtcaagatgctgcgcacacagagaccggccatggtgcagactgaggatgagtac
cagttctgctaccaggctgcgctggagtacctgggtagctttgaccactatgcaacgtaa
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integrated database retrieval system
