Pseudoliparis swirei (Mariana hadal snailfish): 130197728
Help
Entry
130197728 CDS
T09868
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130197728 (fubp1)
03041 Spliceosome [BR:
pswi03041
]
130197728 (fubp1)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130197728 (fubp1)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130197728 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
Secretin_N
Motif
Other DBs
NCBI-GeneID:
130197728
NCBI-ProteinID:
XP_056276548
LinkDB
All DBs
Position
8:8931880..8938763
Genome browser
AA seq
695 aa
AA seq
DB search
MADYSSVAPPSSNNGAGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSAMGGMGGPPRSISEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPDSGGMPDRSVTLTGGPESIQAAKRLLTEIVDKGRPAPAFNHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGGGGGGNGGNGGGGNGGNGGGGGNG
GGGGDGLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGPPDQ
AQHAAEIISDLLRSVQAGGPPGHGGGGGGGGGGGGGGGGGGGGGGRGRGRGQGNWNMGPP
GGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGSP
QQIDYARQLVEEKIGGPVTPMGGPHGGPGPHGGPGPHGPPGPPGPPGAPMGPYNPGPYNQ
GPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKQAADANAAAWAAYYAQYSQQPPAPMTP
TSGAPGTSQSNGQGQQNQQPQDYTKAWEEYYKKQGQAPPQASAAAAAASQPGGQPDYSAA
WAEYYRQQAAYYGTANPQAMGGAPQAPQVLQDPSD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcagcgtggcgcccccgtcctctaacaacggcgctggaatgaacgac
gcttttaaagacgctcttcagagagcccggcagatcgcagcgaagatcggtggcgatggc
gttgcggctcccccgactaacgaattcggttacgggggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccagagacgaagaaagtg
gctacaaatgacgccttttcagcaatgggaggaatgggtggtcccccaaggtcaatatca
gaggaattcaaggttccagatggaatggtcggattcattattggaagaggaggagaacaa
atatcacgcctacagcaagagtctggatgtaagatacagattgcgcctgacagtggagga
atgccagataggtcggtgacattaacaggaggaccagaatccatccaggctgcaaaaagg
ctactaacagagattgttgataaggggcgtccagctccagcattcaaccacaacgacggc
ccgggaatgactgtccaggagattatggtccctgcctcgaaagccggacttgtcattggg
aagggtggagaaaccatcaaaagccttcaggaaagagctggtgtgaagatggtcatgatc
caagacggaccccaaaacacaggtgctgacaagcctctccgaatttcaggagagcccttt
aaagtccagcaagccaaagagatggtgatggagctgatcagagatcaaggcttcagggag
cagaggggcgagtatggttcacgggttggaggtggaggaggaggaggcggcggaggaggc
ggcaacggcggcaatggcggaggtggtaacggcggcaatggcggaggaggaggcaatggt
ggaggcgggggagatggcttagatgttcctgtaccccggtttgcagtgggaatagttatt
ggcagaaatggagaaatgatcaagaaaatacagaacgacacaggcgtcagaattcagttt
aaaccagatgacggcagcactccagaaaggatagcacagatcatgggtccccctgaccaa
gctcagcatgcggcagaaatcatttccgatctgctgcggagtgtacaggccggcgggcct
ccaggacatggcggcggcggcggcggtggcggcggcggcggtggtggtggtggtggcggc
ggcggcggcggtggcagaggccgtggtcgcgggcaggggaactggaacatgggcccccct
ggtggactgcaggagtttaccttcactgtcccaaccatgaagaccggcctcatcattgga
aaaggcggtgagacaatcaagggcatcagccaacagtctggagcccggattgagctgcag
aggaatcctccacccaacgctgatcccaacatcaaaatgttcacagttcgtggctcccct
caacagatcgactacgccaggcagctggtggaggagaaaattgggggacccgtcactccg
atgggtggtccacacggaggtccgggtccacacggaggtccgggtccacatggtccccct
ggaccacctgggccccctggggctcccatgggtccatacaaccctggaccatacaaccag
ggacctccaggaccacatggtccaccagcaccgtaccagcctcagggatggggcaatggc
tacccacactggcaacagggacaacctgatccaaataaacaagcagccgatgccaacgcg
gcggcgtgggcggcctactacgctcagtacagccagcagccgccggctcccatgaccccg
acaagtggagctcctggcacatctcagagcaacggacaaggtcaacagaatcaacaacct
caggactacacgaaagcctgggaggaatattacaagaaacaaggtcaagcgccccctcag
gcctctgcagcagcagctgccgcctcccagcctggcggccagccggactacagcgctgcc
tgggcggagtactaccgccagcaggctgcttactacggcacagccaaccctcaggcaatg
ggtggagcaccacaagcccctcaggttttacaggaccccagtgactga
DBGET
integrated database retrieval system
