Pseudoliparis swirei (Mariana hadal snailfish): 130197735
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Entry
130197735 CDS
T09868
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130197735 (top2b)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130197735 (top2b)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
130197735 (top2b)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Topoisomerases
130197735 (top2b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
130197735 (top2b)
Centrosome formation proteins
Centriole proteins
130197735 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
130197735
NCBI-ProteinID:
XP_056276571
LinkDB
All DBs
Position
1:15476932..15503965
Genome browser
AA seq
1688 aa
AA seq
DB search
MSNGAAGSGALAWMEAANGRGDAGKMEAAKKDKAASKLSVERVYQKKTQLEHILLRPDTY
IGSVEPITQQMWVFDEEIGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMTGIKITID
PDSNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDVKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRHSYKQTWQNNMNKASEPKIKFFDGDDFTCVTFQPDLSKFQMEK
LDKDIVALITRRAYDVAGSCKGVKVTLNGKKLPITGFRSYVDLYVKDKVDETGVALKVVS
ETVNDRWEVCLTLSEKGFQQIGFVNNIATTKGGRHVDYVVDQIVSKLIEVVKKKNKAGVT
VKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCVLTDKFVRAATNCGIVES
ILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSGECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYEDPESLKS
LRYGRIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKVTKSKQEFSFY
SIPEFDEWKKNTENFKTWHIKYYKGLGTSTSKEAKEYFSDMEKHRITFRYSGAEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGNQERHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAGDSNLLKFLY
DDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDTREIVNNINRMLNQQDPLPMLP
RYKNFKGMIHELGQNQFLVSGEVMVIDRNTIEITELPVRTWTQSYKESVLEPMLQGTDKT
AALIHDYKEYHTDTTVKFVVRMSEEKLAQAESVGLHKVFKLQSSLTCNSMVLFDHMGCLK
RYDSVQDMLREFFELRLHYYKLRKDWLQGSLGAEAAKLSNQARFVLEKIEGKISIENKTK
RELIRLLVQKGFESDPVAAWSKSQEKAQEEEERDGHESDAGSVDSGSSSAPNFNYILNMP
LWCLSKEKVDDLLKQRDHKRGELSDIQKKLPDDLWKDDLALFVEELDKVERQEREDQSIG
KTIKMLKGKVGKPKAKKLNLEETLPSPFGRRVEPPTQAIRADAAKKLSRRKKSDIDPALK
LELDEDGLPIEGATGENSAAKPKAPRVKREKKEPGAPRVRKAPAPKGTPVKRAKKRNPWS
EDDSKSDSDVENSQPIVPRETKSQRASASKPKYTFDFSEEEEEADDEEENGGEDAASSPM
ASFKDEFPSSEAKERFSDHNEDEGEDDNEDPYSPAKEKSMPAAPAAKKKETAGVFSSKPA
SSEKSNDSGVRKAPAPKGTAAKRAKKRNPWSEDDSKSDSDAENSQPVVPRETKTASDGSK
SDSDDDEDAAVGAAFSTYSSSSAFDKLLPAKKGPVEAKKPSDAAPKPKKPPAPKAKKPDK
SIWDSDSDTGSKKPAPALKGKGRGRKRKGSGSEDEYNPMKKAAKPVGRKPQKAASDDDDG
GGDKRLGAIANSAATGGGTMGGGAVTDGAMAGGPASRDRPGRAKKEVKYFAESDVGEVDE
EDDDDLFY
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcggcgctctggcgtggatggaggccgcgaatggccga
ggtgatgctggcaagatggaagctgccaagaaagacaaggcggcctccaagttgtctgtg
gagcgagtgtaccagaagaagacccaactggagcacattcttctccgtccagacacgtac
atcggcagcgtggagccgatcactcagcaaatgtgggttttcgatgaagaaataggaatg
aaccagagggaaatcacctacgttcctggactgtacaaaatctttgatgaaattcttgtc
aacgcagcagacaacaaacagagggacaagaacatgaccggaataaagatcaccattgat
cccgactccaacaccatctccatctggaacaacgggaaaggaatcccggtggtggagcac
aaggacgagaagatgtacgtcccggctctcattttcggccacctgctcacctccagcaac
tacgacgacgatgtgaagaaggtcacgggcggacggaacgggtacggcgctaaactgtgc
aacatcttcagcaccaagttcacggtcgaaaccgcctgcaaggaatacagacacagctac
aaacagacgtggcagaacaacatgaacaaggcttcggagcccaagatcaagttctttgac
ggggacgacttcacctgcgtgaccttccagccggacctgtccaagttccagatggagaag
ctggacaaggacatcgtagcactcatcacccgcagagcgtatgacgtcgccggttcctgc
aagggagttaaagtcacgctgaacgggaagaaattaccgatcaccggcttccgcagctac
gtggacttatacgtgaaggacaaagtggacgagacgggcgtcgctctgaaggtggtgagc
gagaccgtgaacgaccgctgggaggtctgcctcacgctcagcgagaagggattccaacag
atcggcttcgtcaacaacatcgccaccaccaagggtggcagacacgtcgactacgtggtg
gaccagatagtgtccaaacttattgaagtagtgaagaagaagaacaaggccggagtgacg
gtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaacgcgctgatcgagaac
cccaccttcgactcccagaccaaggagaacatgacactccagaccaagagcttcgggtcc
aagtgcgttctgacggacaagttcgtcagagccgcaaccaactgcgggatcgttgagagt
atactcaactgggtgaagttcaaagctcagacgcagctcaataagaagtgctcgtctgtg
aagtacagcaagatcaaaggcatccccaagctggacgacgccaacgacgccggtggaaaa
cactcgggcgaatgcactctcatcctcaccgagggagactcggccaagtctctggccgtc
tccggactcggagtcatcgggcgcgaccgctacggagttttccccctgagaggaaagatc
ctgaatgtgcgagaggcgacgcacaagcagatcatggagaatgctgaaattaacaacatc
atcaagatcgttggcctccagtacaagaagagctacgaagaccccgagtccctgaagagc
ctgcgctacggcaggatcatgatcatgacggatcaggatcaagacgggtcccacatcaaa
gggctgctcatcaacttcttccaccacaactggccgtctctcctgaaacacacgttcctg
gaggagttcatcacgcccattgtcaaagtcaccaagagcaagcaggagttttccttctac
agcattccagagtttgacgagtggaagaaaaacacagagaactttaaaacctggcacata
aagtactacaaaggtttgggtaccagtacgagcaaagaggcaaaggagtacttttcggac
atggagaagcaccgcatcaccttccgatacagcggcgccgaggacgacgccgccatcact
ctggccttcagtaagaagaagacggacgacaggaaggagtggctgacgaacttcatggag
gacagacgccagaggaggatgcacggcctgccggagcaatacctgtatggcaatcaggag
aggcacctctcctacaacgacttcatcaacaaagagctgattctgttctccaactccgac
aatgagagatccatcccatccttggttgacggtttaaagccaggccagaggaaggtgctg
ttcacctgcttgaagaggaacgacaagagggaagtgaaggtagcacagctggccggttca
gttgcagagatgtctgcctaccatcatggagagcaagcgctcatgatgaccatcgtgaac
ttggcccagaacttcgtgggcagcaacaacgtgaacatcctgcagccgctgggtcagttc
ggtactcgcatcaatggaggaaaagacgccgccagcccccgttacatctttaccatgctc
agtccacttgccaagctgctgttccccgccggggattccaacctgctcaagttcctgtac
gacgacaaccagaaggtggagcccgagtggtacattcccatcattcccatggtgctcgtc
aacggcgccgagggcatcgggaccggctgggcgtgtaagatccccaattacgacacgcgg
gagatcgtcaacaacatcaaccgcatgctcaaccaacaggaccccctgccgatgcttccc
aggtacaaaaacttcaaagggatgatccatgagctaggtcagaaccagttcctggtcagt
ggagaggtgatggtcattgacagaaacaccatcgagatcacagagctgcccgttcggacg
tggacacagtcgtataaggagtccgtgctggagcccatgctgcagggcacggacaaaaca
gcagctctcatccacgactacaaggagtaccacacagacaccacggtcaagtttgtggtc
cgcatgtccgaggagaagctggcccaggccgagtcggtcgggcttcacaaagtcttcaag
ctgcagtccagcctgacctgcaactccatggtgctgtttgaccacatgggctgtcttaag
aggtacgattctgtccaagacatgctccgggagttctttgagctccgcctgcactactac
aaactgaggaaggactggctacagggcagcctgggagccgaggctgccaagctgagcaac
caggctcgcttcgtcctggagaagatcgaagggaaaatttcaattgagaacaaaaccaaa
cgtgaactgatccgcttgctcgtgcagaaaggcttcgagtccgatccggtggctgcctgg
tccaagtctcaggaaaaggcgcaggaagaggaggagcgggacggacacgagagcgacgcc
ggctcggtggactcgggctcctcgtcggcgccaaacttcaactacatcctcaacatgccc
ctgtggtgcctgtctaaggagaaggtggatgacctgctcaaacagagggaccacaagaga
ggtgagctgagcgacatccagaagaaacttccagacgacctgtggaaggacgacctggct
ttgttcgtggaggagctggacaaagtggagcgtcaggagcgagaggaccagagcatcgga
aagaccatcaagatgttgaaggggaaggtcggcaaacctaaagccaagaagctgaacctg
gaggagacgctgccctcgccgttcggccgcagggtggagcctccgactcaggccatcagg
gccgacgcagccaagaagctgtccagaaggaagaagagtgacatcgatcctgcactgaag
ttggagcttgatgaggacggtttgcccatcgaaggagcaacgggagaaaactctgcagcc
aaaccgaaagctccacgtgtgaagagagagaagaaagagcccggagcgcctcgagtgaga
aaagccccggcacccaaagggacccccgtcaagagggccaagaagaggaacccctggtcc
gaggacgactccaagtccgacagcgacgtggagaacagtcagcccatcgtcccccgagag
accaagtcccagagggcgtcagcctccaagcccaaatacacgtttgacttctcggaggag
gaggaggaggcggacgacgaggaggagaacggcggcgaggacgcggcttcctctccgatg
gcgtcctttaaggacgagttcccctcctccgaggccaaggagcgcttcagcgaccacaac
gaggacgaaggcgaggacgataacgaagacccctactcgcctgccaaagaaaagagcatg
ccggctgcccccgcagctaagaagaaagagacggccggcgtcttctcgtccaagccggcc
tcctctgaaaagagcaatgacagcggagtgagaaaagccccggcgcccaaaggcaccgcc
gccaagagggccaagaagaggaacccctggtccgaggacgactccaagtccgacagcgac
gcggagaacagtcagcccgtcgtcccccgagagaccaagacggcgtcagacgggtccaag
tccgacagcgacgacgacgaagacgccgccgtcggcgccgccttctccacgtactccagc
agctccgcgttcgacaaactattgccggcaaagaaaggccccgtggaggcgaagaagccg
tcggacgcagctcccaaacctaaaaaaccaccagcaccaaaagcgaagaaaccagataaa
tccatctgggactcggactccgacaccggctccaagaagccggccccggctcttaaaggt
aaaggccgagggaggaagaggaagggctccggctctgaagacgagtacaatccgatgaaa
aaagcagcgaaacccgtcggcagaaaacctcagaaagcggcatcagacgacgacgacggc
ggcggcgacaaacgcctcggtgcgatagcgaacagcgcggcgaccggcggcggaacgatg
ggcggtggcgccgtcaccgacggcgcgatggccggcggccctgcatcccgcgaccggccg
ggccgggccaagaaggaggtgaagtacttcgccgaatcagacgtcggggaagtggacgaa
gaggacgacgacgacctgttctactga
DBGET
integrated database retrieval system
