Pseudoliparis swirei (Mariana hadal snailfish): 130197772
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Entry
130197772 CDS
T09868
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130197772
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130197772
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130197772
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
130197772
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130197772
NCBI-ProteinID:
XP_056276629
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Position
1:complement(15506825..15578966)
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AA seq
470 aa
AA seq
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MFDCMDVLAVSPGQMLDFYTSSPSSCMLQEKALKACISGLAHREWQHRRSAHSIETQSTS
SEELVPSPPSPLAPPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRD
KNCIINKVTRNRCQYCRLQKCFGVGMSKESVRNDRNKKKKESPKLELAESYELTAELETI
IEKIRKAHQETFPSLCQLGKYHTNSSADQRVRLDLGLWDKFSELATKCIIKIVEFAKRVP
GFTLLTIADQITLLKAACLDILILRICTRYTPEKDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPIEMDDTETGLLSAICLISGDRQDLEEPSKVDQLQEPLLEALKIYVRKRR
PSKPHMFPKTLMKITDLRSISAKGAERVISLKMEIPGSMPPLIQEMLENSEGQDGGSSRR
SSTRSSSTSAEAGSSPGSKDSAQEDAAAESPESVDPEGAAPPATPPSDEH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgcatggacgtgctggccgtgagtcccgggcagatgctggatttctacacg
tccagcccgtcctcctgcatgctgcaggagaaggcgctaaaagcctgcatcagcggactg
gcgcacagagagtggcagcaccggcggagcgcgcactccatcgaaacgcagagcaccagt
tccgaggagctggtccccagcccgccgtccccgctggcccctcccagaatctacaagccc
tgcttcgtctgccaggacaagtcctctggataccactatggtgtcagtgcatgtgagggc
tgcaagggttttttccgccgaagcatccagaagaacatggtgtacacgtgtcaccgggac
aagaactgcatcatcaacaaggtgacgaggaaccgctgccagtactgccgcctgcagaag
tgcttcggagtggggatgtccaaagagtcggttcgaaatgaccggaacaagaagaagaag
gagagcccgaagctggagctggcggagagctacgagctgacggccgagctggagaccatc
atcgagaagatccgcaaggcccatcaggaaaccttcccctccctctgccagctcggcaaa
taccacacgaactcgagtgcagaccaacgcgtgaggctggacctgggcctgtgggacaag
ttcagcgagctggccaccaagtgcattatcaagatcgtggaatttgccaaacgagtgcct
ggcttcacactgctgaccatcgcggaccagatcacgctcctgaaagctgcctgcctggac
attctgatcctgcgcatctgcacgaggtacacccccgaaaaggacaccatgaccttctcc
gacggactgaccctcaaccggacgcagatgcacaacgccggcttcggcccgctcaccgac
ctggtgttcacgttcgccaaccagctgctgcccatcgagatggacgacacggagacgggc
ctcctcagcgccatctgtctcatctccggagaccgtcaggacctggaggagccctcgaag
gtggaccagctccaggagccgctcctggaggctctgaagatctacgtgaggaagaggcgg
cccagcaaaccgcacatgttccccaaaaccttgatgaagatcaccgacctgcgcagcatc
agcgctaaaggagccgagcgggtcatctctctgaagatggagatcccgggttcgatgccg
ccgctcatccaggagatgctggagaactctgagggccaagacggcggcagcagcaggagg
agcagcacgaggagcagcagcacctcggcggaggcggggtcgagccccggcagtaaggac
agcgcccaggaggacgccgccgccgagtcgccggagtcggtggaccccgagggggccgcg
ccgccggccacgccgcccagcgacgagcactag
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