Pseudoliparis swirei (Mariana hadal snailfish): 130197825
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Entry
130197825 CDS
T09868
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130197825 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130197825 (rpap2)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130197825 (rpap2)
Protein phosphatases and associated proteins [BR:
pswi01009
]
HAD phosphatases
Fcp/Scp phosphatases
130197825 (rpap2)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130197825 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
130197825
NCBI-ProteinID:
XP_056276720
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All DBs
Position
8:11393755..11402596
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AA seq
675 aa
AA seq
DB search
METENRSSGGSSKTSKKGAKRDEEEARRRAVVRETLWERFDLEKRALKVVERLLEDCVAG
DFLVDCARYIAPANYRDTIEERSIGKLCGYPLCSNKLGKIPTQTYTISTKTNKVYDITER
KSFCSNFCYKASKHFELQISNSPLWLRPHESPPEIILMRKGDGGRSGQAVMLLERGLQEE
DVENPLAAQPLDPQQGSAEAGLDHSESGDVEQEQDFVSSVVSQRQGPRVQWGDLPKYTDK
EKGHGKKEKEKKQRGGGDEKELEVHRSQGADGERKIREDEKRRVSFSCKTEVGTEGKKHL
HSSNTEKLNGEQLPEERADEPSVEEAIARLKLTNLSETVTHTAPPPVDLTAKQTENTNLL
TSPAKDTDSLTESIHLPSSTLINTNQDGHVTALTSQPGLNITQVGMSRRGAAGLRQVLEN
HTAAVEPNSARLNLIECLRRSLKDWSTAETRKFLYGADHSPCSPFVDVKEEKDLGGEEEE
LDEDDLEDEGTNEEAEGVGAGVQKRPSAAAPDYHVLQQETQQLELRVREFYKGTWILPEE
VEEPHGSKMATEPVMPLVDSRAQHLIQKRIAVEKLTSCLRNIVGPLRLSINDFSSDLNNL
VRTFRFTNTNIVHRTPEWTLLTVMLLHLLSEVSPVVREALEMPTSEEYLNTMMEEHSLQE
QDLLNIVQLFKTSAH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgagaacagaagcagcggaggctccagtaaaacctctaaaaaaggtgcgaaa
cgcgatgaagaagaagcaagaaggagagcggtcgtgagggagacgttatgggagaggttt
gatctggagaagagagccttgaaggtcgtggagcgtctcctggaggactgtgtggctgga
gacttcctggtggactgtgcaaggtacatcgctcctgctaattacagagatactatcgag
gagagatccattggtaaactgtgtggttatcctttatgttcaaataaacttggaaagatc
ccaactcaaacgtatacaatttctactaagaccaacaaggtgtatgacatcacagagcgc
aagagtttttgtagtaacttctgctacaaagcctccaaacactttgagctccaaatctca
aattcacctctttggctgaggccgcatgagagtcctccagaaattatattgatgaggaaa
ggtgacgggggtcgttctggtcaggcggtgatgctgttggagaggggtctccaagaggag
gatgtcgagaaccctcttgctgctcaacccctggaccctcagcagggttctgctgaggcc
ggcctcgaccacagtgaaagcggtgacgttgaacaagagcaggactttgtctccagcgtg
gtttcccagcggcagggaccgagggtgcaatggggcgacctgcctaaatatacagacaag
gaaaagggtcatgggaagaaggagaaggaaaagaaacagagggggggtggcgatgaaaag
gagcttgaggttcatcgaagtcagggcgcagacggggagcgaaaaattagagaagatgaa
aagagacgagtgtcattttcttgtaaaacagaagttggaactgaaggtaaaaaacatctg
cactcctcaaacacagagaaacttaatggagagcagctgccagaggagagagctgacgaa
cccagtgtggaagaggctatcgctcggctgaaactaacaaatttatccgagacggtcact
cacacggctccgccgcctgttgacttaacagccaaacaaacggaaaacacaaatctactc
acttctccagccaaagacacagacagcttaacagaaagcatccatctcccatcttcaact
ctgatcaacacgaatcaggacggtcacgtcacggcattgaccagccagccaggcctgaac
atcacccaggtaggtatgagcaggaggggggcagcagggctacgacaagtactcgagaac
cacacggctgcagtcgaacccaactccgcccggctgaatctcatcgagtgcctgaggaga
tcgttaaaggactggagcaccgccgagacccggaagttcctgtacggtgccgaccattcg
ccctgctcgccttttgttgacgttaaagaagaaaaagatttggggggagaagaggaggaa
ctcgatgaagacgaccttgaagatgaggggaccaatgaggaggcagagggggttggtgct
ggggtgcagaagagaccgtctgctgcagctccagactaccacgtgctgcagcaagagacc
cagcagctggagctccgagtcagagagttttataagggaacctggattctaccggaagag
gtggaggagccgcatggaagcaagatggcaacggagccagtgatgccgcttgttgactct
cgtgctcagcacctcatccagaaacgaatcgccgtggagaagctcaccagctgtctcaga
aacattgtcggccctctgcgtctctccataaacgacttctcctctgacctgaacaacctt
gtcaggacattcaggttcaccaacacaaacatcgttcacagaactccagagtggaccctc
ctaaccgtcatgcttctccatctcttgtctgaggtgtctccggtggtacgagaagccttg
gagatgccaacatcagaggagtatttgaacacaatgatggaggagcacagtctacaggag
caggacctcctcaacatagtccagctgtttaaaacctcggcacactga
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