Pseudoliparis swirei (Mariana hadal snailfish): 130197849
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Entry
130197849 CDS
T09868
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
KO
K06485
integrin alpha 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04518
Integrin signaling
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130197849 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
130197849 (itga6b)
04518 Integrin signaling
130197849 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130197849 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130197849 (itga6b)
04810 Regulation of actin cytoskeleton
130197849 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130197849 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130197849 (itga6b)
04515 Cell adhesion molecules [BR:
pswi04515
]
130197849 (itga6b)
04090 CD molecules [BR:
pswi04090
]
130197849 (itga6b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130197849 (itga6b)
Exosomal proteins of breast milk
130197849 (itga6b)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin alpha subunits
130197849 (itga6b)
CD molecules [BR:
pswi04090
]
Proteins
130197849 (itga6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
130197849
NCBI-ProteinID:
XP_056276761
LinkDB
All DBs
Position
8:12552097..12567573
Genome browser
AA seq
1083 aa
AA seq
DB search
MEGRTTCGLWTVVFLLGCGRLSAFNLDTDNVLQKTGDKGSLFGFSLAMHHQVAPEDKRML
LVGAPRAKKLWNQNSEVTGGLYKCTITSDSLKCDRVIFDNDEDINTESKENQWMGVTVNS
QGPGGKIVTCAHRYKRRARVNTALESRDIIGRCYVLSQSLTIDPASGEEGGSWHFCESRP
RGHEMFGSCQQGLSATFDKDYHYLIFGAPGAYNWKGMVRLEQKNESFIEMDIFDDGPFEV
GDEDEKNPELVPAPPNSYLGFSLDSGSGLTKKGQLTVVAGAPRANHSGSVVLLKKGDDTT
KILLEEFTLEGEGLASSFGYDVAVLDLNADGWLDIVVGAPQYFEKDGIIGGAVYVYVNKA
GKWNTVTPTRINGPQDSMFGLAVENLGDINQDGYDDFAVGAPYDNHGAGNVYIYQGAAKG
LRSEKASQVLSGQAFGVTLFGYSLSGNLDMDKNAYPDLAVGSLSDSVFLFRTRPVISIKK
EIKFSPNEIDFTKKKCGNKFCLDVDACFTFTAKNYAQSLTLVFSLEADAEHRKKNLPSRA
TFSDSSENPYQSKGTITMDMSGKEKCIKRKLFIQSDIQDKLHGIPIDVSVEIQDGSRKRR
QSSTAEVPPILDANEPMKTRSQVNFLMEGCGGDNVCQSNLQVNYRYGHRTTDGGIFTPFE
MKGGVPVITLSDQKNITLEVKVSNLEGDDAHEASLIATFPRSLTYSASRVAPTELEVICK
ANKNGSNADCELGNPFRRNSATTFYIILSTSGISLNTTELEITLQLVTTSVQVKIAPIKA
KLKVVIMLQLSLSGQAQPSQVYFTGKVKSESDMKVESDIGSAITHQFRIINLGKHLEDFG
TATLDIHWPKKTVKGKWLLYLMDISSTGVDKLECSPKAEVNPLKMEPKSRMRRAAANTRG
SDEGSISHLIDKKKSKTLSCDDGADCVTIKCPLRGLDSSAVITLKSRLWNSTFIESFSKL
HHAEVIVKASLHVDGARNAALENSETQVRLTVFPKRVEAHSGGMPWWIIVLSILFGLLLL
ALLAFLLWKCGFFRRAKYEDRVPSYHAVCIKREERARNARNGNWENLEKQPWITTRNIVP
NSQ
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaggaccacctgtggactgtggacggtcgtcttcctcctgggatgtggacga
ctgtcggcgttcaacctggacaccgacaacgtcctgcagaagaccggagacaaaggcagt
ttgttcggcttctctctcgccatgcaccatcaggtcgctccggaggataagagaatgctg
ctggttggtgccccgagagcaaagaaattgtggaatcaaaattctgaagtgacgggagga
ctttacaagtgtaccataacctccgactcactgaaatgtgacagagttatctttgataac
gacgaggatataaatacagaaagcaaagagaaccagtggatgggagtgacagtcaacagt
cagggcccaggaggcaagattgtgacatgtgcccatcgctacaagcggcgtgctcgggta
aacacagccctcgagtcccgcgacattatcggccgctgctacgtgctgagtcagtcgttg
actattgatcccgcgtcgggtgaagagggagggagttggcatttctgtgagagccggccc
agaggccacgagatgtttggctcctgccagcagggactctctgccacattcgacaaggac
taccactacctcatcttcggggctcctggagcgtacaactggaaaggtatggtacgcttg
gaacaaaagaacgaatcattcatagaaatggatatctttgacgacggtccttttgaggtt
ggagatgaggacgaaaagaaccctgagctggttcccgccccacccaacagctaccttggc
ttctctctggactctggaagcggtctgaccaagaagggccaactcaccgtggtggcagga
gctcccagagccaatcacagtgggagtgtggtgctgctgaagaaaggcgatgatacaacc
aaaatcttgctggaagagttcaccctggaaggagaagggctagcctcgtctttcggctac
gacgtggccgtgctggatctcaatgcggacggttggctggacatagtggtgggagcaccc
cagtactttgagaaggatgggataataggaggagccgtctatgtctatgtcaacaaagcc
ggaaagtggaacacagtgacccccaccagaataaacggacctcaggactccatgtttggc
ctggcggtggagaacctgggggacatcaatcaggatggttacgatgattttgcagtggga
gctccatatgacaatcatggtgcagggaatgtttacatctaccagggagcagccaaaggt
ctcaggtctgaaaaagcctcacaggttttgtccggccaggcttttggagtgactctgttt
ggctactctttgtccggaaacttggacatggataagaacgcctaccctgacttggcggtc
ggatcgctctctgactccgtctttctcttcagaactcgcccagttattagcatcaagaag
gaaatcaagttctcgccgaatgaaatcgacttcaccaaaaagaaatgtggcaacaagttc
tgcttggatgttgatgcgtgcttcaccttcactgccaagaactacgctcaaagtctgacc
ttggtgttctccctcgaggcagatgctgagcacaggaagaagaatcttccgtccagagcg
accttctctgactcctctgaaaatccctaccagtccaaagggaccatcaccatggacatg
tcaggaaaggaaaagtgcattaagcgtaagcttttcatacagagtgatattcaagacaag
ctgcacgggatccccatcgacgtgtccgtggaaatccaggacggcagccgtaaacggaga
cagagctcaactgctgaagtaccacctatcctcgacgccaatgagccaatgaaaactcgg
tcgcaggtgaatttcctgatggaagggtgtggcggcgacaatgtttgccagagcaacttg
caggtgaattatcgctacggccacaggacgactgatggcggcatattcaccccattcgaa
atgaagggcggcgtgccggtgatcacgctcagtgaccagaagaacatcaccttggaggtc
aaagtgtccaatctggagggagacgatgcacacgaagcctctttgatcgccaccttccct
cgctccctaacctactctgcttcccgcgttgcacctactgagctggaggtaatctgtaaa
gccaataaaaatggttcgaatgctgactgtgagcttggaaaccccttcagacgtaactca
gcgacgaccttctacattattctgagcacatcaggcatctctctcaacactactgaactg
gagattactcttcagctcgtaacgacaagtgtccaggtgaaaatagccccaatcaaagca
aagttgaaggtggtcatcatgttgcagctgtccttatcaggacaagcccagccgtctcag
gtctactttacagggaaggtcaaaagtgagtcggacatgaaggttgaaagtgacattggc
agtgccatcacacaccagttcagaataatcaatctcgggaagcacttggaagactttggc
accgccaccctcgacatccactggccaaaaaagacagtgaaggggaagtggctgctctac
ctgatggatatcagctccactggagtagacaagctagagtgctcccctaaagcggaggtc
aaccctctgaaaatggaaccaaaaagcaggatgagaagagcagcagcaaacacccgggga
agtgacgagggctcgatttcacatttaattgacaagaaaaaatcaaaaactctgtcctgt
gacgatggggcagactgtgtgacgatcaagtgccccctacggggcctggacagcagtgca
gtcatcactctcaaatctcgcctctggaacagcacctttatagagagtttttccaagctc
catcatgccgaggtgatagtgaaggcctctctgcatgtcgatggcgctaggaacgcagcg
ctagaaaattctgagacacaggtgaggctgacggtgttcccaaagagggttgaagctcac
tccgggggaatgccatggtggatcatcgtgctgtccatcttattcgggctgctgctgttg
gccctgttggctttccttctgtggaagtgtggcttttttaggcgtgccaaatatgaagac
agagttcccagttaccatgctgtttgcatcaaacgggaggagagggcaagaaacgcaagg
aatgggaactgggaaaacttggaaaagcagccctggatcacaacaaggaacattgttcct
aacagccaatga
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