Pseudoliparis swirei (Mariana hadal snailfish): 130197982
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Entry
130197982 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130197982
04121 Ubiquitin system [BR:
pswi04121
]
130197982
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130197982
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130197982
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130197982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-Nse
HypA
C1_2
DUF7129
zf-RING_16
Zn_ribbon_6
DZR_2
DUF7560
DZR
Motif
Other DBs
NCBI-GeneID:
130197982
NCBI-ProteinID:
XP_056276968
LinkDB
All DBs
Position
8:complement(13494686..13501068)
Genome browser
AA seq
309 aa
AA seq
DB search
MAEAPPRPGRFFCHRCSAEISPRLPDYTCPRCDSGFIEELAVERSTETGSVSTSSTSDPN
RPAFENMDHQHLLTFPSGYGPFALGIFDENFDLRTRLPTEDNRETENRREREMASRQRYS
ARQPRGRHVPRRPGMRHEGVPTLEGIIQQLVNGIIAPTAMPNIGMGPWGMLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRERIKCLPTVTITEEHVGAGLECPVCKEDYSVEES
VRQLPCNHLFHHDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMHFSSSSSSSPSSP
SNENAARNS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccccgcggcccggccggtttttctgtcaccggtgttcagcagagatt
agtccgcgtttaccggactacacctgtccacgctgtgattccggttttattgaggaactg
gctgtggaacgaagtactgaaactggttctgtatccacgtcttccaccagtgatcctaac
cgcccagcctttgagaacatggatcaccaacacttgttaacatttccctctgggtatggt
ccgtttgctcttgggatttttgatgaaaactttgaccttcgaacgcggcttcccacagaa
gacaaccgcgagacagaaaacaggagagagagggaaatggcgtcacgacaacgatacagt
gcgcggcaaccccggggtcgacatgttcctcgacgaccgggtatgcgccatgaaggagtg
cccacattagaaggaattatccagcagttagtaaatggaattatagcacctacagccatg
ccaaatatcgggatgggaccatggggtatgctgcattccaatccaatggactacgcttgg
ggtgccaatggtcttgatgctatcattacacagttattgaaccagtttgaaaacacgggt
ccacctcctgcagaccgggaaaggattaagtgtttacccaccgttaccattacagaagaa
catgtgggtgctggtttagagtgtcctgtgtgcaaagaagactacagcgtcgaggagagt
gttagacaactgccatgcaatcacttgtttcaccatgactgtatagtaccgtggctggaa
cagcacgatacatgtcctgtgtgcaggaagagtctgagtggacagaacaccgccacagac
ccaccagggttatcaggaatgcacttctcgtcctcgtcctcttcctcccccagctcacct
agcaatgagaatgctgccagaaactcatag
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