Pseudoliparis swirei (Mariana hadal snailfish): 130197988
Help
Entry
130197988 CDS
T09868
Symbol
extl2
Name
(RefSeq) exostosin-like 2 isoform X1
KO
K02369
alpha-1,4-N-acetylglucosaminyltransferase EXTL2 [EC:
2.4.1.223
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pswi01100
Metabolic pathways
Module
pswi_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
130197988 (extl2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130197988 (extl2)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
130197988 (extl2)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130197988 (extl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Glycos_transf_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
130197988
NCBI-ProteinID:
XP_056276982
LinkDB
All DBs
Position
8:complement(15007856..15011470)
Genome browser
AA seq
407 aa
AA seq
DB search
MNETNTRAYYTVMCPRDGRFSGCCAGECRPSGDYSVAAGAETCKPGVHRDGLSLSVRLPR
CRSLRCLLGLRRAYLVWPILLLLLVGAALTALLPPAGDQGGIDVLGALRRATSRKESPAR
GRAEEEEEEEEQRFTIVIQTYNRTDILLKLLNHYQAVPHLQQIIIVWNNIGKQTPLKLWK
SLQPHPVPVVFKEQASNLMRNRLQAFPEIDTDAVLMLDDDTLLSVPDISFAFSVWKQFSD
QIVGFVPRKHVSTPGGVYSYGSFELQDPETAGGDKYSMVLIGAAFFHRRYLQVFQDQPAA
VHALVDETQNCDDIAVNFAVALYLREHSAGTVKKPSGVFVKPVDLRNLEKDASSGYQGMW
HRPEHLLQRSYCLNRLTQIYGVMPLRFSNLMISQFGFPSYANHKSSA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactaatacacgggcttattatacagtcatgtgtccccgagacggccgcttc
tccggctgttgtgcaggtgaatgccgcccgagtggagattattctgtcgccgctggggct
gaaacgtgtaaaccgggtgtccatcgtgatggcctgtccttatctgtgcgcctcccgaga
tgcaggtccctccgatgcctcttggggctccgtcgagcctatttggtttggccaatcctg
ctgctgctcctggtcggcgcagccttgaccgctctgctgccccctgctggggaccaaggg
ggcatcgatgtcctgggagcgctgcgcagggcaacgtcccgaaaggagagtcctgcacgg
ggccgcgcagaggaggaggaggaggaagaggagcagaggttcaccattgtcattcagacg
tacaaccgcacagacattttgctcaaactcctgaaccactaccaggcagtgccccatctt
caacagatcatcatcgtctggaacaacattgggaagcagacgcccctgaagttatggaag
tctttacagcctcatccggtccccgtggtcttcaaggagcaggcgagcaatctgatgcgc
aacagactgcaagcgttccccgagattgatactgacgctgtgttgatgctggatgacgac
accctgctcagtgtccccgacatcagttttgctttctctgtctggaagcaattttccgac
cagattgtcgggttcgtcccacggaaacatgtgtcgacgccgggaggcgtgtacagctac
ggcagcttcgaactgcaggaccccgaaacagctggcggcgacaaatactccatggtgttg
atcggtgctgccttcttccaccgtcgctacctgcaggtcttccaggaccaacccgcagcg
gttcatgcgctggtggatgaaacgcagaactgtgacgacattgccgtcaactttgctgtc
gcgctctatttgagggagcactcggcaggcaccgtcaagaaaccctccggggtcttcgtc
aaacccgtggacctccgcaacctggagaaggatgccagcagcgggtaccagggtatgtgg
catcgtcctgaacaccttctccagaggtcctactgcctcaacaggctgacgcagatctat
ggcgtcatgccgctccgcttctccaacctgatgatctcccagtttggcttccccagctac
gccaaccacaagagcagcgcttga
DBGET
integrated database retrieval system
