Pseudoliparis swirei (Mariana hadal snailfish): 130198023
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Entry
130198023 CDS
T09868
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-A
KO
K08517
vesicle transport protein SEC22
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
pswi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130198023 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130198023 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130198023 (sec22ba)
Membrane trafficking [BR:
pswi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
130198023 (sec22ba)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
130198023
NCBI-ProteinID:
XP_056277035
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Position
8:11054799..11057320
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AA seq
215 aa
AA seq
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MTSLTIITRLTDGLPLAASIQEDEKSGRDLQHYQSQAKQLCRKLNAQSPDRCTLEAGDMN
FHYLIAQGVCYLFLCEASFPKKMAFAYLGELHNEFYEQYGKKVATVTRPYSFIEFDTYIQ
KTKKSFIDGRARRNFGSINTELQDVQRIMVANIEEVLQRGESLSALDTKASNLSSLSKKY
RSDAKYLNTRSTYAKVAAVSVFFITLIIYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactcacgatcatcacgcggctcacggacggacttccgctcgcggcgtccata
caggaggatgaaaagtcaggaagagacctccagcactaccagagccaggccaagcagctg
tgccgcaagctgaatgctcagagtccggaccgctgcaccctggaggctggagacatgaac
ttccactacttaatagcacagggtgtgtgctacctgttcctctgtgaggcttcatttccc
aaaaaaatggcctttgcataccttggagaactccacaatgaattctatgagcagtatgga
aagaaagtagccacagtgacaaggccatactctttcattgagtttgacacgtacatccag
aaaacaaagaagtccttcatcgacggcagggccaggaggaactttggcagtatcaacaca
gagctgcaggatgtccagagaattatggtggcaaatattgaggaagttctgcaaagagga
gaatctctttctgctctagatacaaaagccagcaatctgtccagcctgtcgaagaagtac
cgcagcgatgccaaatatctcaacacccgctccacgtacgccaaggtggctgctgtgtcc
gtgttcttcatcacactcatcatctatgtgcgtttctggtggctctga
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