Pseudoliparis swirei (Mariana hadal snailfish): 130198033
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Entry
130198033 CDS
T09868
Symbol
onecut3b
Name
(RefSeq) hepatocyte nuclear factor 6 isoform X1
KO
K24171
one cut domain family member 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130198033 (onecut3b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
130198033 (onecut3b)
BRITE hierarchy
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GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130198033
NCBI-ProteinID:
XP_056277048
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Position
8:13321781..13335220
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AA seq
484 aa
AA seq
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MELTMENLHSVSLHSQMGDLMGSPHARPSQSLGSAPRNMVSHTPGSRSAMVSGMASLLEG
SGGDYRTDPSALSGHLHPSISMCETGMSLSNTYTTLTPLQHLPPISTVSDKFHHPHSHHH
AAAHQRLSAGNVSGSFTLMRDDHRGLASMGNLYSHYPKEMSVSGMGHSSLSPLSSGLGSL
HNSQQPLSAYGPSAHLSTDGKMLSPVSGFESHASMLSRSDQEHLARSLGGHGHGMISNLN
SMHHHPHSHLHSQANGAVMLGDRESHGHGAGQAESGMQGEEINTKEVAQRITAELKRYSI
PQAIFAQRILSRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAAC
KRKEEDRGRERNQLPKKQRLVFTDLQRRTLVAIFRENRRPSKEMQITISQQLGLELSTVS
NFFMNARRRCTDRWDTEEHSHGVHGHGHGHMHTPHGNSNSNNNNNNNNSTIQPGTSSAAT
FSTA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaccatggagaaccttcacagcgtctccttgcactcccagatgggagacctc
atgggctctccgcacgcacggccgtcgcagtccctcggctccgctccccggaatatggtt
tcgcatactcccggctcgcggtcagccatggtctccggcatggcttcactcctggagggc
tccggcggggactaccggacagatccgtctgcgctgtctggacacctgcacccgtccatc
agcatgtgcgagaccgggatgagcctaagcaacacgtacaccactctgacccctctgcag
catctacctccaatatccaccgtctcggataagtttcaccacccgcactcccaccatcat
gctgccgcccatcaacgactctccgccgggaacgtcagcggcagcttcacgctgatgcgg
gacgaccaccgggggctcgcctccatgggcaatctgtacagtcactaccccaaagagatg
tccgtgtccggtatgggtcacagctcgctctccccgctgtcaagcgggctgggttctttg
cacaactcccagcagccgctgtcagcctacggtccgagcgcacacctctccaccgacggc
aagatgctctctccggtgtcagggtttgagtcccacgcctccatgctgtcccgaagtgac
caagagcacctagctaggagtttagggggccacggccacggtatgatctccaacctcaac
agcatgcaccaccacccacacagtcacctccactcacaggcgaacggcgcggtgatgctg
ggggaccgagagagtcacggtcacggagccgggcaggcagaatcaggcatgcagggggaa
gaaatcaacacaaaggaggtggcacagcggataacggccgagttaaagcggtactccatc
cctcaggccatattcgcccagaggatcttgagtcggtcgcagggaaccctgtcagacctg
ctacggaaccctaaaccctggagtaagctcaagtcaggccgggagaccttcaggaggatg
tggaagtggctgcaggagcctgagtttcaacgcatgtctgctctccggctggccgcatgt
aaacgtaaggaggaggaccgaggacgagagcgcaaccagttgccaaagaagcagcgactg
gtcttcaccgacctgcagcgtcgcaccctggtagccatcttcagagagaaccgccgtccc
tccaaggagatgcagatcaccatctcccagcagctgggcctggagctctccaccgtctcc
aacttcttcatgaacgcacgccgccgctgcacggaccgctgggacacggaggagcacagt
catggggtgcacggccacggccacggccacatgcacactcctcacggaaacagcaacagc
aacaacaacaacaacaacaacaactcaacgatccaacccggtacctcctctgccgccacg
ttctccacggcctga
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