Pseudoliparis swirei (Mariana hadal snailfish): 130198095
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Entry
130198095 CDS
T09868
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130198095 (irf4a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130198095 (irf4a)
SSDB
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Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130198095
NCBI-ProteinID:
XP_056277151
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All DBs
Position
8:complement(9482432..9487462)
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AA seq
464 aa
AA seq
DB search
MNLDEDSGLPVSCGNGKLRQWLIDQIDSSIYSGLVWENDGKSIFRIPWKHAGKQDYNRDE
DAALFKAWAMFKGKYKEGVDKLDPPTWKTRLRCALNKSNDFDELVERSQLDISDPYKVYR
IIPEAAKRGMKMSMEETPSHVNSLGYIPPYTSSHDQVSGYMVSQERRDWRDYSPTEQQPV
PPPHQHGPHAELQYGQLHYPSPFSRVWPGSNIENGFQLSLHTCFSESQPPVYSINPNNGI
TDFSLHVSLYYRESLVKEVTTTSPEGCRITSHSSSSPSSSSSSSSSSPRLEDKLHSGAEI
ILFPFPYPESQRQGADMLPNVLERGVLLWMTPDGLYAKRLCQGRVYWDGPLAPYMDKPNK
LEKEQPCKLFDTQQFLIELQEFAHNGRHLPRHQVALCFGDEYPDPQRTRKMITAQVEPVF
ARKLVYYYQQNNGHYLRALDHIQDQNTSTTNDYPPLRPLQHIQE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgatgaggacagtgggctgccagtcagctgtggcaatggaaaattgagacag
tggctgattgatcagattgacagcagcatatattccggcctggtttgggaaaatgatgga
aagagcatctttaggattccgtggaaacatgcaggaaaacaagactataacagagacgag
gatgccgcgctcttcaaggcatgggccatgtttaaggggaaatataaggagggagtggac
aagctggatccccccacatggaaaaccagactgcgctgtgctcttaataaaagcaatgac
tttgatgagttagtggaaagaagccaactggacatctcagacccctataaagtctacaga
atcatcccagaagctgccaaaagaggaatgaagatgagtatggaggagacaccatcacat
gtaaattccctgggctatattcctccatatacgtcttcacatgatcaggtatctggctat
atggtttctcaggagagaagggactggagagattactcacccacagaacagcaacctgtt
cctcctccacatcagcacgggccccatgcagagctacagtacggtcagctccactacccg
tcaccgttcagccgggtttggcccgggtcaaacatagaaaatggttttcagctctccctc
cacacctgcttttcagagtcccaaccacctgtgtattcaatcaacccaaacaatggcata
acagattttagcctgcatgtgtccctatactacagagagtctttggtgaaggaggtcacc
accaccagcccagaaggttgtcggatcacttctcattcctcctcctctccatcctcttca
tcctcttcatcctcctcttccccacgcctagaggacaagcttcacagcggcgcagaaatc
atcctttttcctttcccgtaccctgagtctcagaggcagggtgctgacatgcttcctaat
gtcctggagaggggggtgcttctgtggatgacacctgatgggttatatgctaagcgcctc
tgccagggacgggtttactgggatggacctctggctccttatatggataaacccaacaag
ctggagaaggagcagccatgcaaactgtttgacacccagcaattcctgattgagcttcaa
gagtttgcccataatggccgacatttaccgaggcaccaggtggcgctatgttttggagac
gagtaccccgacccacagcgcacgagaaagatgatcacagcacaggtggagccagtgttt
gccagaaagctggtgtactattaccagcagaacaatggccactacctgcgggctcttgat
cacatccaggaccagaacacatccacaacaaacgactatcctcccctgagaccacttcag
catattcaggagtga
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