Pseudoliparis swirei (Mariana hadal snailfish): 130198148
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Entry
130198148 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130198148
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
130198148
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
130198148
NCBI-ProteinID:
XP_056277220
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All DBs
Position
8:complement(13465392..13492513)
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AA seq
1159 aa
AA seq
DB search
MLNVMDMNEVSPASATMKKEAAGGSDXSHLRSTSSQNCLDSGSPAAPSGTQPGAASNVVM
DETEDGEEESKFQHPRLRRAGGSSSGGGRGGGAGGGGGGGGSIRMNNFTPGGGAASSGSR
RNSNKEPRHMHSEDAPDAPRPTGASRATETQPPCPGGAAQRGETSRASGAEASASAVALE
VSNATVGDGCKSVAPISRMKCNKNGECRRDSGTGSLRSIMSKQEKQTGGSGRADEGGSAK
RGACNSTTASMDGSITPGGSLTGGHGGESANPGTTPVSSGGPEKKDIKVSFSNTPSRKAS
SSLHSPTQTQTQQPRNSVTFEKPEDGPPIVPAEDAEPQGSQVNFMHRQFSSMLQPGVNKF
SLRMYGSQKAVEREQDRVKSAGSWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITFFKE
ETSTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPGTIQRKYLKTWFIVDFVSS
IPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTY
DLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSNCWVSLNKMENDTWSELYSFAV
FKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQE
KYKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNFNCRKL
VASMPLFANAEPYFVTAMLTKLHFEVFQPHDYIIREGTIGKKMYFIQHGVCSIITKGILA
MKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETVAID
RLDRIGKKNSTLMHKVQHDLNSGVFNNQENELIQEIVKYDREMVKSVDLQRPRAMSMTPS
IGGMFAQPGQSQSGSAIATLQQAVAMSFFPQMASPLVGPGTLQSPRVVRRFHVMQNLASP
VAMSPLQSQPPQTLGGAFGSAISSPPVQSPLAASGRTFQYMAGPSGSQLSLVQHHAPSPT
QTQHRPASHKSTHSLHAGSLSQDTRAISASQLSLPQEGTQQAASAAPSPPPSTRTSNNSI
GPPQPPHPSLPGPSGVGRLAGAQQRVVFASTPPPGGPTGIGAVAAAAESGPPDSGVPKKD
SIVSPPELDSARSRLSSNL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtcatggacatgaatgaggtttcgccggcgtctgccaccatgaagaaggag
gcggcgggcggcagtgatntcagccacctcagaagcaccagcagccagaactgtctggac
tccggttccccagcagcaccgagcggtacgcagcccggtgcggccagcaacgtcgtgatg
gacgagacggaggacggagaagaggagtctaagtttcagcatccgcgattgcgccgagcc
ggggggagcagcagcggcggaggtagaggaggaggagcaggaggaggaggaggaggagga
ggcagtatcaggatgaataactttacaccaggagggggagccgcgtcctcaggttccagg
agaaactcaaacaaggagccccgccatatgcactcagaggacgctcctgacgcgccacgg
cccactggtgcctccagagccaccgagacccagccaccctgtccgggcggtgctgcccag
cgcggcgagaccagcagagcatctggggcggaggcgtcggcttcagcggtcgcgttagag
gtttcaaacgcgacagtgggtgatggttgcaaaagcgtcgctccaatttccaggatgaaa
tgcaacaaaaatggagaatgcaggagggactcgggtaccgggagcctgcgctcaatcatg
tccaagcaggagaagcagacaggagggtcagggagggccgacgaaggagggagcgccaag
cgaggagcctgtaactcgaccaccgccagcatggacggctcgatcacaccaggcgggtcc
ctgactggagggcacggaggggagagcgcaaaccccggcactacccccgtgtccagcggt
ggccccgagaaaaaggacattaaggtgtccttctccaacacgccaagccggaaagcatcg
tcctcgctgcatagcccgacccagactcaaacccagcagcccaggaactctgtcactttc
gaaaagcccgaggatggaccgccaattgtgcccgccgaggacgcggagcctcagggcagc
caagtcaacttcatgcatcggcagtttagtagtatgctgcagcctggagttaacaaattc
tccttgcgcatgtatggtagtcaaaaagcagtggaaagagagcaagatagggtaaaatca
gctggaagttggattatccacccttacagcgatttcaggttctactgggatttcacaatg
ctgatgtttatggtgggcaacctgatcatcatccccgtgggcatcaccttcttcaaggag
gagaccagtacgccctggatcatcttcaacgtggtctctgacaccttcttcctcatggac
ctggtgctcaactttcgcactggaatcatcattgaggacaactcggacatcattttggac
cctggaaccattcagaggaagtacttaaaaacgtggttcattgtggactttgtctcctcc
atcccggtggattacatattcctcatagtggagaaagggattgactcagaggtgtacaag
actgctcgggccctaagaatcgtccgctttaccaagatcctaagtcttctgaggctgttg
aggctctccagattaatacgttacattcaccagtgggaagagatcttccatatgacctat
gaccttgccagtgcggtgatgcggatctttaacctgattggtatgatgctgctgctgtgt
cactgggatggctgcctacagttcctggttcccatgctgcaggacttcccctcaaactgc
tgggtgtccctcaacaagatggagaatgatacctggtcagagctgtactcctttgccgta
ttcaaggcaatgagccacatgctgtgcattggttatggccggcaggccccggagagtctt
tcagacatctggctcaccatgctgagtatgattgtaggcgcgacttgctacgctgttttt
attggccacgcaacagcgcttatccagtccctggactcctccagacggcagtatcaggaa
aagtacaaacaagtggagcagtatatgtccttccacaagctgccttccgatttccggcag
aaaatccacgactactatgagcacagataccaaggcaagatgtttgatgaggagagcatt
ctgggagaactcagcgagcccctcagagaggaaattgtaaacttcaactgtcgcaagctg
gtcgcgtccatgccgctgtttgccaacgcagagccgtactttgtgacggccatgttgacc
aagctgcattttgaggtattccagccacatgattacatcataagggaaggcaccattggg
aagaaaatgtacttcattcagcacggagtctgcagcatcatcaccaagggcatcctggca
atgaaactttctgacggctcttattttggagagatctgtttattaacgaggggccggcga
acagccagcgtgcgagcagagacttactgccgactctactctctgtctgtggaccacttc
aatgaggtgctggaagaatatcccatgatgagacgcgccttcgagactgttgccattgac
cggctagaccgcataggtaaaaagaactccaccctgatgcacaaggtccagcatgatctc
aactctggtgtcttcaacaaccaggaaaacgagctgatccaggagattgtcaagtatgac
cgtgagatggtgaagtcggtggacctgcagcggccgcgggccatgtctatgaccccgtcc
atcggcggtatgtttgctcaacctggccagtcgcagtcgggctccgctatcgccacgctt
cagcaggctgtggctatgagcttttttcctcaaatggcaagtccactggtgggtccaggg
actctgcagtctccccgtgtggtgcgacggttccacgtgatgcagaacctggccagccca
gttgccatgtctcctcttcagtctcaaccccctcaaacattaggaggggcgtttggatct
gcaatctccagcccaccggtccaaagtccgcttgcagcttcaggacggactttccagtac
atggcaggaccctccggttcacaattgtccctcgtacagcaccatgcacccagccccact
cagacccagcataggcctgcctcacacaagagcacccactcccttcatgcaggtagcttg
agccaggatacccgggccatatctgcctcccagctttcacttccccaggagggaacacaa
caagctgcctctgcagcccccagccctccaccatcaacccgcacttccaacaactccatc
ggtccccctcagccacctcaccccagcctgccagggccctcaggcgtggggagattggca
ggagctcaacaaagggtggtctttgcctccacaccccctcccggtggacctactggaata
ggggcagtagcagcagctgctgaatcaggacctccagactctggagttcccaagaaagat
tcaattgtcagccctccagagctagactctgccagatcccggctgtcttccaacttgtga
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