Pseudoliparis swirei (Mariana hadal snailfish): 130198165
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Entry
130198165 CDS
T09868
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu-like isoform X1
KO
K05693
receptor-type tyrosine-protein phosphatase mu [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130198165
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130198165
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130198165
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130198165
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130198165
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130198165
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Type II RPTP family
130198165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
ig
Tc-R-P
Ig_3
I-set
Ig_2
Pur_ac_phosph_N
Y_phosphatase3
PTPlike_phytase
TM_ErbB1
PTP_tm
Motif
Other DBs
NCBI-GeneID:
130198165
NCBI-ProteinID:
XP_056277256
LinkDB
All DBs
Position
8:8244652..8387991
Genome browser
AA seq
1556 aa
AA seq
DB search
MDKVVNCLFAAITLLLSARGEVFKGDCNFEKPLAAYGYSQGRDDDLDWEQINTREKPSSD
PWMPSGSAFMMMNTSGRFAGQKALLLTSQLRENDTHCVTFHYYMGGRDNSHPGHLNVYIK
ENNSPMGMPVWNVSGPATRSWGQVELAISTYWPNFYQIVFEAVTSGQRGLLAIKDVVVQG
HQCMNTPHFLTIKGVEVNAGQTASFHCTVNGRKRDNFRLWLQGIGGREAPMKSTKPWNNR
RFIGTFDVENTTKGDSGRYRCIVHSDKGVGVSNYGELTIKQPPVPIAPPQLTAVGATYLW
IQLNANSINGDGPIIDREVEYRTVSGTMYDLQPVDKTTHKIGHLDPDTEYEISVLLTRPL
EGGTGAPGPPLRARTRCAEPMHGPQRLEVVDIQSKQVTVRWESLGYNVTRCYSYNLTVQY
RSRVAGKEETREEMCYDTQSRDPQHTIHNLTPFTNLSVKLVLRNPEGVKESTELEVQTEE
DVPGAVPLESIQGSAYEEKIILKWREPAQTYGIITQFEISYKAVSSFDPEFDVSNQSGKV
VKLGNETTHLFTGLYPGSTYSFSLRASTAKGYGPPIITQFTTKISAPSMPAYDQETSLNQ
TDSTVTVLLKPAQSRGAPVSAYQVVVEEERPRRARGTAEILRCYPVPIHFQNATLLNSQY
YFTAQFPSGGIHSPQPFTVGDNKTYNGYWNAPLLPQKSYSVYFQAVSTANGETKIDCVRV
ATKAAILVTQLTTPYIRVVPAAGDNQLTGAATHKPDAVEPEKQTDHTVKIAGVIAGILLF
VIIFLGVVLLMKKRRTYHSYTYYLKLAKKRKETLNSTRQEMTVMVNSMDKSYTEQGTNCD
EALSFMDTHNHTLNTRSEGAPTLNGRSECALTLNGRSECALTLTGRSECALTLNSRSECA
LALTLNSRAGSPPSSFTLPKANTLSASIPTNAYYPDPFVPTAILDESQNMGSDTSSLVQS
HTHSLRKREPVDVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWD
SAKKDENRMKNRYGNIIAYDHSRVRLQALEGEQSSDYINANYVDGYHRPNHYIATQGPMQ
ETVFDFWKMVWQENTAAIVMVTNLVEVGRVKCCKYWPDDTEIYRDIKVTLIETELLSEYV
IRTFAVEKRGAHEIREIRQFHFTGWPDHGVPYHATGLLGFIRRVKSKTLTNAGPMVVHCS
AGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL
CGDTTIPASQLRSVYYDMNRLDPQTNSSPIKEEFRTLNMVTPTLRVEDCSIALLPRNHEK
NRCMDVLPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVL
DYHCTSIVMLNDVDPAQLCPQYWPENGVHRHGAIQVEFVSADLEEDIISRIFRIYNAARP
QDGYRMVQQFQFLGWPMYRDTPMSKRSFLKLIRQVDKWQEEYDGGEGRTVVHCLNGGGRS
GTFCAISIVCEMLQHQRSVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNSG
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggataaagttgttaattgcttgtttgctgcaattaccctgctgttgtcggcacgaggg
gaagtgtttaaaggcgattgtaactttgaaaagccgctggcagcatatgggtacagccag
ggcagagacgatgaccttgactgggagcagatcaacaccagagagaagccttcttcggat
ccatggatgccctcaggttcagccttcatgatgatgaacacatctggacgctttgccggg
cagaaggccttactgctgacatcgcagttgagggagaatgacacccactgcgttaccttc
cactactatatgggaggccgagacaacagccacccgggtcacctcaatgtctatatcaaa
gaaaacaacagtcccatggggatgcctgtttggaatgtgtccggtccagccactcgctcc
tggggacaggtggaactggccatcagcacctactggcccaacttctaccagattgtgttt
gaagccgtaacctcagggcagcgtggcttgctggccatcaaagacgtcgtggtccagggc
caccagtgcatgaacacacctcacttcctgactataaagggggtggaggtcaacgctggg
cagacggcatcttttcactgcaccgtcaatgggcgcaaaagggacaatttccgcctctgg
cttcagggcatcggtggacgggaggccccgatgaaatctactaaaccttggaacaaccgg
cgcttcataggcactttcgatgtggagaacacaaccaagggcgactcgggccgctaccgc
tgcatcgtccactcagacaaaggggttggagtgtccaattacggagaactaaccataaaa
cagcctccggttccgatcgcaccaccccagctgactgctgttggtgccacgtacctttgg
atccagctgaacgccaactccatcaacggggacggcccgatcatcgaccgggaggtggag
taccgcaccgtgtccggcacaatgtacgacctgcagcctgtggacaagaccacgcacaag
atcggccacctggatccagacacggagtacgagatcagtgttctactgaccagacctctg
gagggaggcaccggagcccccggaccgccactgagggccaggaccagatgtgctgaacca
atgcacggcccccagcggctagaggtggtggacatccaatccaaacaggtgacagtgcgc
tgggagtctctgggctacaatgtgacccgctgctacagctacaacctgaccgtccagtac
cggtccagggtggccggcaaggaggagacccgcgaggagatgtgttatgacactcagagc
cgtgaccctcagcacaccatccacaacttgacgcccttcaccaacctcagtgtcaagctg
gtgctacgcaatccagagggggtcaaagagagcacggagctggaggttcagactgaagag
gatgtgccaggggctgttcctctggagtccattcagggcagtgcctatgaggagaagatc
atcctgaagtggagagaaccagcacagacctacgggatcatcactcagtttgagatctcc
tataaggcggtgagctcctttgacccggagtttgacgtctccaaccagagtgggaaggtt
gtgaagttgggcaacgagaccacccacttgttcacaggcctctacccgggctcgacctac
tccttcagcctgcgcgccagcacagccaagggctacggcccgcccatcatcacccagttc
accaccaagatttcagctccttccatgccggcatacgaccaggagacctctctgaaccag
acagacagcacggtcactgtgctgcttaaacctgcccagagcagaggcgcacctgtgagt
gcgtaccaggtggtggtggaggaggaacgtccacgcagagctcgaggaacggcagaaatc
ctgcgctgctacccagttcccattcacttccagaatgccacgctcctcaactcccagtac
tacttcactgcccagttcccctccggcgggatccactcgccccagcccttcaccgtgggg
gacaacaagacctacaacggctactggaacgcccctctgctgcctcagaaaagctacagc
gtctatttccaggctgtcagcacagccaacggggagaccaaaattgactgtgttcgagta
gccaccaaagccgccatactcgtgactcagctcacaaccccctacatccgcgtcgtcccg
gcggccggtgacaaccaactaacaggagcagccactcacaaacccgacgctgtggagcca
gagaaacagacggaccacaccgtgaagatcgccggggtcatcgctggcatcctcctcttc
gtcatcatctttttaggagtggtactcctcatgaagaaaagaagaacctatcactcctac
acttactacctgaaattggccaagaagcgtaaggagacgctgaacagcacccggcaggag
atgaccgtgatggtcaactccatggacaaaagctacacggagcagggcaccaactgtgac
gaggcgctgtccttcatggacacgcacaaccacacgctgaacacccgcagcgagggcgcg
cccacgctcaacggccgaagcgagtgcgcgcttacgcttaacgggcgcagcgagtgtgcg
ctcacgctcaccggacgcagcgagtgcgcgctcacgctcaacagccgcagcgagtgcgcg
ctcgcgctcacgctcaacagccgagctggatcacccccctcctccttcacgctgcctaaa
gccaacacgctcagtgcgtccatccccaccaacgcctactacccagatccctttgtgcca
actgctatcttagatgagagccagaacatgggcagcgacaccagcagcctggtgcagtcg
cacacccactcgctgaggaagcgggagccggtggatgtgccgtaccagacgggtcagctg
cacccggcgatccgcgtggcagacctcctccagcacatcacccagatgaagtgcgccgag
ggctacggcttcaaggaggagtacgagagcttttttgaaggacagtctgcgccatgggac
tctgccaagaaggatgagaaccgcatgaagaaccgatatgggaatattattgcatatgat
cactcccgtgtcaggctgcaggccctggagggggaacagagctccgattacattaatgca
aattacgttgatggctaccataggccaaatcactacatcgccactcaaggccccatgcag
gagacggtcttcgacttctggaagatggtctggcaggagaacacggcagcaatcgtcatg
gtgaccaacctggtggaagtgggcagggtaaagtgctgtaaatactggcctgatgacact
gaaatctacagagacatcaaggtgacgctgatagagaccgagctgctgtcggagtacgtc
atcaggacctttgctgtagagaagagaggggctcatgagatccgggagatccgacagttt
cacttcacggggtggccggaccacggggtgccctatcacgccacgggcctgcttgggttt
atcaggagagtcaagtccaagactctgaccaatgctgggcccatggtggttcactgcagt
gccggggcgggacggaccggctgcttcatcgtcatcgacatcatgctggacatggcggag
agagagggggtggtggacatttataactgcgtgagggagctgcgctcccggagggtcaac
atggtccagactgaggagcagtatgtcttcatccatgatgccatcttggaggcgtgtctc
tgtggcgacaccactattcctgccagtcagctccgctccgtctactacgacatgaaccgc
ttggacccgcagaccaactccagccccattaaagaggagtttaggactctgaacatggtg
actcccacgctgcgagtggaggactgcagcatcgccctgctgccccggaaccacgagaag
aaccgctgcatggacgtccttcctccagaccgctgcctccccttcctgatcaccatcgac
ggggagagctccaactatatcaacgctgcgctcatggatagttacaagcagccctctgca
ttcatagtgacccagcacccgttaccaaacacagtgaaggacttctggagattggttctg
gattaccactgcacatccatagtgatgctcaacgacgtggacccggcccagttgtgccca
cagtactggccagaaaacggagtccaccgccacggagccatccaggtggagtttgtctcc
gccgacttggaggaggacatcatcagccgaatattccggatttacaatgcagcacggcct
caggacggctaccggatggtgcagcagttccagttcctgggctggcccatgtacagagac
acgcccatgtccaagcgctccttcctcaagctaattcgacaggtggacaagtggcaggaa
gagtacgacggaggcgagggacgcaccgtggtccactgtctgaatggaggcggccgaagt
gggacattctgtgccatcagcattgtgtgcgagatgcttcaacaccagcgctctgtggat
gttttccacgctgtcaaaacactaaggaacaataaacccaacatggtggacctactggac
cagtacaagttttgctatgaagtggcactggagtacttgaactctgggtaa
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