Pseudoliparis swirei (Mariana hadal snailfish): 130198168
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Entry
130198168 CDS
T09868
Symbol
gbx1
Name
(RefSeq) homeobox protein GBX-1
KO
K09321
homeobox protein GBX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130198168 (gbx1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130198168 (gbx1)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
130198168
NCBI-ProteinID:
XP_056277261
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Position
8:complement(5596376..5598765)
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AA seq
319 aa
AA seq
DB search
MQRPGVHGTAFSIDSLIGTPQPRPGHLLYTGYPMFMPYRSLVIPQALTHSGIPPLAPLAS
FAGRLTNTFCASLGQGVPSMVALTATMPSFSDPPDSFYPPQELPGPRLSAADSGARRQES
PHSDERHSRDKGSERLNFSETFQTISGETKLYSSDDEKLDLKSSKDAACSDREDSSADSE
NESFSDGNNCGSLSQKSKLKTGSQDALPTSGGSAGKSRRRRTAFTSEQLLELEKEFHCKK
YLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVNNRSGEPVRNPKIVVPIPVH
VNRFAVRSQHQQIEQGSRP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaccaggcgtccatgggacggcgttttcaatcgactccctgatcgggactccg
cagcccagaccgggacacctgctgtacacgggctaccccatgttcatgccctacagatct
ttggttattccacaagctttaacccactctggtatacctcctctcgcgcctttggcttct
ttcgcgggacggctcaccaacacgttctgtgccagtttgggacaaggggtgccatccatg
gtggcgctcaccgcgacgatgccaagcttctcggatcctccggacagtttctacccgccg
caggaactccccggtccccgtctgagcgccgcggattccggagcgaggaggcaggagagt
ccgcactccgatgagcgccacagccgggacaagggctccgagaggctcaacttctcggaa
acttttcaaacaatatcaggtgagaccaaactgtacagctcggacgacgagaagctggac
ctcaaatcctccaaagacgccgcgtgcagcgaccgggaggacagctccgcggacagcgag
aacgagagcttctcggacggcaacaactgcggctcgctgtcccagaagagcaaactaaaa
accgggtcgcaggacgcgctgccgaccagcggcggctcggcggggaagagccgccggaga
cggacagctttcaccagcgagcagctgctggaacttgaaaaggagtttcactgtaaaaag
tacctttctctgactgagcgctcgcagatcgcgcacgcgctgaaactgagcgaggtgcag
gtgaagatctggtttcagaaccgcagggccaagtggaaacggatcaaagccggaaacgtc
aacaaccggagcggagagccggtgaggaatcccaaaatcgtggtgcccatcccggtgcac
gtcaacaggttcgctgtgaggagtcagcaccaacagatagagcaagggagcaggccatga
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