Pseudoliparis swirei (Mariana hadal snailfish): 130198175
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Entry
130198175 CDS
T09868
Name
(RefSeq) transcriptional repressor p66 alpha-like isoform X1
KO
K23194
transcriptional repressor p66
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130198175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130198175
03036 Chromosome and associated proteins [BR:
pswi03036
]
130198175
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130198175
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
130198175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
FAM76
DUF7573
Zn_ribbon_10
Motif
Other DBs
NCBI-GeneID:
130198175
NCBI-ProteinID:
XP_056277271
LinkDB
All DBs
Position
8:complement(13558847..13574393)
Genome browser
AA seq
766 aa
AA seq
DB search
MQFTSSDSVLFSSGGHTQGMSEEAVRQTRSQKRALEKDVDPQSIETSDADNESKKSKLDP
SEPSTEEQTEPEPDSGLTREGQGQTTVGPEPEKEQGLSPPSLALPLASQPVKDDQERTQR
TMAEPSSDNRTDCSDTASEERAEPAVDTKSQVPLAESKVPSSMLAAAEVKATIKVEVQTG
EQPMDMSTSRGSIKREKRPPSSEDDDVIVLSDNDSPSPPMNGLSHFKELDRDLLMKSSPA
ERERIIKQLKEELRLEEAKLVLLKKLRQSQIQKDTLQKPTGLSGSSAPPPLIRGTITSNK
GTQQMLTGRSSGPVIPPPLVRGGQQMLSKHGSQIIMPPLVRGAQPISVSPQQIQALRQQQ
QQQLVASGGSGSGPPPLLLGHRISASLTQGQRGTGNSGLIRIGASVNTQASASGVKSSSL
GNGGVSVVSVSESPASRQAAAKLALRKQLEKTLLEIPPPKPAAPEFNFLPSAANNEFIYL
VGLEEAVQNLLDTIHRGKTGAALSKNITREPLTCTQCKTDFTCRWRQDKTKGGAFLCEHC
MSSSQKRVLKAEHTNRLKAAFVKALQQEQEIEQRIFQQAASPVSHSSSSSSSSMKAERGL
SQQQKQVHARVSSLQHLHQASRGANMVHQHSIKQSSQGQLSLGVSSLAVRGVPHSFSSSS
QLQSAVAAAALVSRPGKHAHAFHRSVQSSKVSSSGIAGSRNFSGGSASPTAWKKQSHSNA
GVTMAYVNPSLTGHKTSAAADARQREYLLDMIPSRSSISQTANTWK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcacgagttccgactcggttttgttttcttcgggagggcacacacaggggatg
tctgaggaggctgtccgccagacgcgcagccagaagagggcgctggaaaaggatgttgat
ccccagtctatagaaacctctgatgctgacaatgaaagcaaaaagtctaagttggaccct
tctgaaccctcgacagaggaacaaaccgaacctgaacccgactctggactgacacgggaa
ggtcagggccagactacggttggaccagagcccgagaaggagcagggcctgtccccgcca
tctttagcgttacctttggcctctcagccggtgaaggacgatcaggagcggacccaacgg
acgatggctgaacccagctcggacaatcgaactgactgcagtgacacagccagcgaggag
agggcggagccagctgtggatacaaagagccaggtcccactggcagagtcaaaggtgccc
agtagcatgctggctgcagcggaggtgaaagccaccattaaagtggaagttcagacggga
gagcagcccatggacatgagcacctccagaggcagtataaaaagggagaagcggcctcca
tcatctgaagatgacgatgtcatcgtcctgtcagataatgactccccgagtcctccgatg
aacggcttgagccactttaaggagctggacagagacctgctcatgaagagcagcccagca
gagagggagcgcatcattaagcagctgaaggaggagctgagactagaggaggccaagctg
gtgctgctgaagaaacttcgacagagccagatacagaaggacactctccagaagcccaca
ggtctgtctggctcctctgctcctcctcctctcattcgaggaacaattacaagcaataaa
ggcactcagcagatgttgacaggccggagttcaggcccagtcatccctccaccgctggtg
agaggagggcagcaaatgttgtccaaacatggctcccagattataatgccgcctctggtc
agaggggcacagcccatctccgtatctccacagcagatccaggctctccgccagcagcag
cagcagcagttggtggcctctggaggctccggctcaggacctcctcctctgctgttgggc
cacaggatctccgcctccctaacccagggccagagaggcacgggcaactcggggctcatc
agaattggcgctagtgttaacacgcaggcctcggcatccggtgtgaagagctcttccttg
ggaaacggcggcgtctctgtggttagcgtgagcgagtctccagccagccgccaagctgca
gctaaactcgccttacggaaacaactggagaaaacgctactggagattcccccgcccaag
cctgcggccccagagtttaacttcctgccatcggcagccaataatgagttcatctacctg
gtggggctggaagaagcggtccagaatctgctggatacaatccacagaggaaagaccggc
gcagcgctgtcgaagaacattaccagagagcccctcacctgcacccagtgcaaaaccgac
ttcacctgccgctggaggcaggacaagacaaaaggcggggctttcctctgcgaacactgc
atgtcatccagtcagaaaagggttttgaaagccgagcataccaatcggctgaaagccgcg
ttcgtcaaagctctgcagcaagagcaggaaatagagcagcgtatttttcagcaggcagcc
tcgccagtttctcacagtagctcctcgtcctcttcgtcgatgaaagcagagagggggttg
tctcagcagcaaaagcaggttcacgccagagtgtcttccctccagcacctccaccaggcc
agtcgaggagccaacatggttcaccaacactccatcaagcagagctcccagggccagctg
tcccttggcgtctcatcattggcggtgaggggagtcccccattccttctcctcctcctcc
cagctgcagagtgcagtggcggctgcagctttggtgagccggccaggtaagcatgcccac
gctttccaccgctctgtccagagttcaaaggtgagcagcagcggaatcgccggcagcagg
aatttcagcggaggtagtgcctcacccactgcatggaagaagcagagccacagcaacgca
ggagtcacgatggcttacgtgaaccccagcctgaccggtcacaagacgtcagccgcggcc
gacgctcgtcagagggagtacctgctggacatgatcccctctcgctcgtcgatctcgcag
actgcaaacacatggaaataa
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