Pseudoliparis swirei (Mariana hadal snailfish): 130198227
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Entry
130198227 CDS
T09868
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3
KO
K03504
DNA polymerase delta subunit 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03030
DNA replication
pswi03410
Base excision repair
pswi03420
Nucleotide excision repair
pswi03430
Mismatch repair
pswi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130198227 (pold3)
03410 Base excision repair
130198227 (pold3)
03420 Nucleotide excision repair
130198227 (pold3)
03430 Mismatch repair
130198227 (pold3)
03440 Homologous recombination
130198227 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130198227 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130198227 (pold3)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130198227 (pold3)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130198227 (pold3)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
130198227 (pold3)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
130198227 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
130198227 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
CDC45
Motif
Other DBs
NCBI-GeneID:
130198227
NCBI-ProteinID:
XP_056277348
LinkDB
All DBs
Position
8:complement(2019799..2026993)
Genome browser
AA seq
457 aa
AA seq
DB search
MDELYLDNIDEYVNDQDKIVTYKWLSLTLGVHVNTAKQMLFHYLDHKRKESSAQLNATYL
VSGKFVDNGQSSHRVSVVKEDKLEDCKSKMSLVVSVHVYSVQKALLKDSGPLYGVDYDAV
RDNLKDCGRHSAIRCAGATPVRPPAPETQRAATPEPRDNVAGVTREAGVAPKPAAKPQRG
IMEMFASKPAPKNQDGGRDGKEGQKEEEPTVDAHKSKPDSKANLMNFFGSQAAKRAVKTD
DAERQRPTTSTTREKPAAAVELQQDSEEESEKDSRTDSSRKDSSRKESSRTDSSRTDSSR
SKTKRLVDSDSEEEKMEKKKRRRIKRPEPDSSDDDVIPDSPQPMETRDPSPKKKAEPVSR
SHRGDSEMKTRKRRRVLKSRTFLDDEGSIVTEKSYESESYSEAEDDVQAVTPAPRNPAAG
KLPAGPKPDDKRSHKKTSAAANKGTKQASIMGFFQKK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctttatttggataacatcgacgaatatgtcaacgaccaagataagatcgtg
acctacaaatggctgagtctcactctgggggtccacgtcaacacagccaagcagatgctc
ttccattatttggatcacaagaggaaggagagttccgctcagctcaacgccacctacctg
gtgtcggggaagtttgtggacaacggccaatcgagtcacagggtgtcggtggtcaaagag
gacaagctggaagattgtaaatccaagatgagcctggtcgtcagcgtccacgtctacagc
gtccagaaggcgctgctgaaggacagcggcccgctgtacggcgtcgactacgacgccgtc
agagacaacctgaaggactgcggcagacacagcgccatccgctgtgcgggcgccacgccc
gtgaggcccccggcgccggagacccaacgggccgcgaccccggagccccgagacaacgtg
gccggcgtgacccgggaggccggcgtggccccgaagcccgccgccaagccgcagaggggc
atcatggaaatgtttgcgagtaagcccgctccgaagaaccaagatggcggcagagacggg
aaggaggggcagaaggaggaggagcccacggtcgacgcccacaaaagcaaacccgactca
aaagccaatctgatgaacttctttgggagtcaagcagcaaagcgagccgtgaagacggac
gacgccgagcggcagcgaccgacgacctcgacgacccgagagaaaccagctgctgctgtg
gagctgcagcaagactcagaggaagagtccgagaaagactccaggacagactcctctagg
aaagactcctctaggaaagagtcctccaggacagactcctccaggacagactcctccagg
agcaaaaccaagcggctggtggattctgacagcgaagaggagaagatggagaagaagaag
aggcggaggatcaagaggccggaacccgacagcagcgacgacgacgtcattccagactct
ccacagccgatggaaacgagggacccgtcaccgaagaagaaggccgagccggtgtctcgt
tcacatcggggggactccgagatgaagacgagaaagaggagacgggtcctgaagtctcgg
acgtttctagatgacgaaggatccatcgtgacggagaaaagctacgagagcgagtcgtac
tccgaagccgaggacgacgttcaggccgtgacaccggcgcccagaaaccctgccgccgga
aagctgccggccggccccaagccggacgacaagaggagccacaagaagacgtctgccgcc
gcaaataaaggaaccaagcaagcctccatcatggggttcttccagaagaaatga
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