Pseudoliparis swirei (Mariana hadal snailfish): 130198287
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Entry
130198287 CDS
T09868
Symbol
pgap6
Name
(RefSeq) post-GPI attachment to proteins factor 6
KO
K24576
transmembrane protein 8A/B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130198287 (pgap6)
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Gene cluster
GFIT
Motif
Pfam:
DUF3522
PPC
TauE
Motif
Other DBs
NCBI-GeneID:
130198287
NCBI-ProteinID:
XP_056277383
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Position
8:complement(9917965..9926313)
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AA seq
771 aa
AA seq
DB search
MAFRFLRCLLFVALTTRTSADDGPVTFVSELSSKPAQKLSKYGWYGNVRLYRFQVPEETA
VARWLFTVTKGHSFHCGQHNVSIYIQYGAPPVINPTGTVFPNSTLWSPCLSLILLVTSNN
STTFNLSNPAPGDWYIGAHLPEDDGRIEQKGFPSCSYFFQPQLSIRRAVDTPILQQGTFL
QQTAAPVRPARLKLYVPEFASSLSVSVADCSSAEGADSGNCSLVLKLGSTSLQHRPVAVN
CSGIGCSATLSHPPWDTWLRVVVESSLDNRTVTFSIISNYTVGCKPKSVGLKADGGVINL
RGNRSDSNSTSAGNSSVMTDAVALSNESASLFTPLSACVWSIPVLYEEVDVLSLRFTPAT
GPNVSVTDAHPTLLTYPLYTQATGGTLNLQLTLNTTNATLKNSSSVVACLSPWAPVLELN
HSQPCRTALFGGYSVHVNASDPKAVVRLPFPQSATWYLTLQLTCNSSDCGNTSLVSVVPE
VFISACVEDCGTYGECRLLRSYSYLYAACVCKAGRSGWGCTDNSTAQSYRRQLTATLLLT
LSNLSFLPAIVVALKRCYITEASVYLFTMFFSTFYHACDQPGVAVMCIMDYDALQYCDFL
GSVCSIWVTILCMARIRDVFKYTLFMLGVLLIAMSMQLDRKGLWNLLVPVLCAILCMVTA
WVYRGVQRRHCYPPSWKRWVLFLIPGALCALIGVCLYIFTETEDNYYYTHSLWHILVASC
VVFLLPPKEKNREVLGWSRGWSWSRSPRVCGYTLCQSDKEELYTVTGATGH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcattccgttttctacgttgcctccttttcgtcgccctgacgacgcggacctcagca
gacgatggaccggtgacatttgtctcagagctctcgtccaaaccagctcagaagttgtcc
aagtatggttggtatggcaacgtgaggctgtacaggtttcaggtcccagaggagacggcc
gtcgctcgctggctgttcacagtcaccaagggccactcgttccactgtgggcagcacaat
gtctccatctatattcagtatggtgctcctccagttatcaacccaacggggaccgtgttt
cccaattcaacactatggagcccctgtctgtctctgatcctactggtgacttcaaacaac
tccacgacctttaacctctctaatcctgctcccggtgattggtacattggtgcccacttg
cctgaagatgatgggcgcatagagcaaaagggctttccgtcttgctcgtacttcttccag
cctcagctatcaatccggagagcagtggacacgcccattttacagcaaggcacatttctc
cagcagaccgcagcgcctgtcagacctgcccgccttaagttgtatgttccagagtttgcc
tcctctctgtccgtctctgtggctgactgttcgtcagcggagggagccgacagtgggaac
tgttcactagtcctcaagctcggctctacttctctgcagcaccgcccagtcgcggtgaac
tgctcagggattggctgctctgcaactctttctcacccaccttgggatacctggttacga
gttgttgtggagagcagcctcgacaaccgtactgtgacctttagtatcatctcaaactac
acagtggggtgcaagccaaaaagtgtcggccttaaagcagacggtggcgtcattaatctc
cgtggcaaccgcagcgattccaactccacatcagcaggcaacagctccgtgatgacagac
gcagtcgccttgagcaacgagtcggcgtccctgttcacgccgttgtcggcgtgtgtgtgg
agcatccccgtgctctacgaggaggtcgatgttctgtcacttcgattcactcccgccacc
ggacccaacgtgagcgttacagatgctcaccccaccctgctcacctaccccctgtacaca
caagccactggtggtacactcaacctacagctcacactcaacactactaatgcaacccta
aaaaacagcagcagtgtggtcgcctgtctctctccgtgggctccggtcctcgaactcaac
cactctcaaccctgtcgcacagctttgtttggagggtacagtgttcacgtgaatgccagt
gatcccaaagctgtggtccggttgccttttcctcagtcagcaacatggtacctcaccctg
cagcttacatgcaacagcagtgactgtggtaatacatcactggtgtctgtggtcccagag
gtgtttatcagtgcctgtgttgaggactgtgggacatatggggaatgtagactcctgaga
tcctacagctacctgtacgctgcctgcgtctgcaaagctggccggagcggttggggctgc
actgacaactcaacagctcagtcgtaccgtcgccagttgacagcaactcttcttctcacg
ctcagtaatctgtctttcctgcctgccatcgtggtggccctcaaacgctgctacatcact
gaggcctccgtctaccttttcacaatgttcttttccacgttttaccacgcatgtgaccag
cctggtgtcgcagtaatgtgtataatggactacgatgccctacaatattgtgacttcctg
gggtcagtctgttccatctgggtcaccatcctgtgcatggctcgcatcagagatgtattc
aaatatactctgtttatgctcggggttctgctcatagccatgtcgatgcagctggaccgc
aaaggcctgtggaacctgttggttcccgtcctctgcgccatactgtgcatggtcactgcc
tgggtgtaccgaggagtgcagcggcgtcattgttacccgccttcatggaagcgctgggtc
ctcttcctgatccccggggcgctctgcgccctcattggggtatgtttgtacattttcact
gagaccgaggacaactactactacacacactcgctgtggcacatcctggtggccagctgc
gtggtgttcctgctgcccccaaaggagaagaacagggaggtgctgggctggagcagagga
tggagctggagccggagcccccgggtttgtgggtacactctctgtcagagcgacaaggag
gaactctacactgtcacaggagcgactgggcattga
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