Pseudoliparis swirei (Mariana hadal snailfish): 130198296
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Entry
130198296 CDS
T09868
Symbol
toe1
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130198296 (toe1)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130198296 (toe1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Radial_spoke
TFB6
zf-CCCH_9
FAM176
EIIBC-GUT_N
DUF6033
RR_TM4-6
zf_CCCH_4
Connexin
CPSF100_C
SLC52_ribofla_tr
Presenilin
DUF3504
Piezo_TM1-24
Rrn7_cyclin_N
NatA_aux_su
DUF6739
Motif
Other DBs
NCBI-GeneID:
130198296
NCBI-ProteinID:
XP_056277396
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Position
8:complement(19567859..19574689)
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AA seq
563 aa
AA seq
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MVSKLVVPVIDVHNDNFKELWPALVLAIKTSSFVALDTELSGLGNRKSLLAESIEDRYRA
ICQAARSRSILSLGIACFKRLDDKAAETYLIQVYNLTLLCSEEYVIEPQSVQFLVQHGFD
FNKQYASGIPYLKGNGTGASDNQGVHIRALFTELLRARKPVVFHNGLIDIAFLYQSFYSH
LPERLDTFTANLSEMFPAGIYDTKYVTEFELRLTASYLEYAYKKCKLDNSRHVASGGTGP
HVHTEFCQYAGAMSSYVDYRVCPAVASAEGPTNVCQRFSAFGWCPNGAQCLLSHDTDLII
FQDEKGVGDKRKRRKRNRNKKRGRGEVEDDPSIFGGAPEKKILHMEADPGETPTDPRPEG
GLLADVDGNPPQSESADMEADGERNGDDPNCRNPVMVAPVAEDDTNVKNNTNESREEDGD
GGGGGGPLSGDPSKAEAPKTKADPGTHRAGFDAFMTAYIFAHSCSLIKKEGVRAVEKKEK
KEEKEEKKEETEKKEEKEEEKKEKKEETEKKEEEKGEPSWLPSCLNKVYLSGKATPLNVV
KSTFARSSKAHIQKMKMVWGGSV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctaaactggtcgttccggtcattgatgtccataatgataacttcaaagagctt
tggcccgctttggtactggccattaaaacgtcttccttcgttgcgctggacacggagctg
agcggtctcggaaacaggaagtccttgctggccgaatcgatagaggaccggtacagagcc
atatgccaggctgcgcgctcccgctccatcctctccctgggaatcgcctgtttcaagaga
ctggacgacaaggctgcagaaacatacctgatccaggtgtataacctcaccctgctgtgt
tcagaggagtacgtcatcgagccccagtcagtccagttcctggtgcagcatgggtttgac
tttaacaagcagtacgccagcgggataccttacctcaagggaaatggcacgggagcgtcg
gacaaccagggggtccacatccgggctctgttcaccgagctgctgcgggccaggaagccc
gtcgtgtttcacaacggcctcatcgacatagccttcctgtaccagagcttttattcacat
ctgcccgagcgcttggacaccttcaccgccaacctgtccgagatgtttcctgccggcatc
tacgacaccaaatacgtcacagagttcgagctccggctcactgcctcctacctggagtac
gcctacaagaaatgtaagctggacaacagtcgccatgtggcctccggagggaccgggcct
cacgtccacaccgagttctgccagtacgccggtgccatgtccagctacgtggactacaga
gtgtgtccagctgtggcctccgctgaggggccgactaacgtctgccagcgcttctctgca
tttggctggtgtccaaacggcgcccagtgcctgttgtcccatgacacggacctgatcatc
ttccaggacgagaagggagtgggggacaagaggaaacggagaaagaggaaccgaaacaag
aagagagggagaggcgaggtggaggatgacccctccatctttggcggcgcccctgagaaa
aaaatcctccacatggaggcggaccccggagaaacgccaaccgacccgcgcccagaagga
gggcttctggcggacgtggacggaaaccccccgcagagcgaatcggcggacatggaggcg
gatggcgagcggaacggagacgaccccaactgcaggaacccggtgatggtggcgccggtg
gccgaggacgacacaaatgtaaaaaacaacacaaacgagagcagagaggaagatggagat
ggaggaggaggaggaggaccgctgagcggcgacccatccaaggccgaagctccgaagacc
aaggccgacccaggaacgcaccgggctgggttcgatgccttcatgacggcatacattttt
gcccactcgtgcagtctgatcaagaaggaaggagtgagagctgtggagaagaaggagaag
aaggaggagaaggaggagaagaaggaggagactgagaagaaggaggagaaggaggaggag
aagaaggagaagaaggaggagactgagaagaaggaggaggagaagggggagccttcgtgg
cttccttcgtgtctcaacaaggtctacctcagtggcaaggccactcctctcaacgtggtg
aaaagtaccttcgccaggtcgtccaaagcacacatacagaagatgaagatggtgtggggg
gggtcagtgtag
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