Pseudoliparis swirei (Mariana hadal snailfish): 130198310
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Entry
130198310 CDS
T09868
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00061
Fatty acid biosynthesis
pswi00071
Fatty acid degradation
pswi01100
Metabolic pathways
pswi01212
Fatty acid metabolism
pswi03320
PPAR signaling pathway
pswi04146
Peroxisome
pswi04216
Ferroptosis
pswi04920
Adipocytokine signaling pathway
Module
pswi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130198310 (acsl3b)
00071 Fatty acid degradation
130198310 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130198310 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
130198310 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130198310 (acsl3b)
03320 PPAR signaling pathway
130198310 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pswi01004
]
130198310 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130198310 (acsl3b)
Enzymes [BR:
pswi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
130198310 (acsl3b)
Lipid biosynthesis proteins [BR:
pswi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130198310 (acsl3b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of breast milk
130198310 (acsl3b)
Exosomal proteins of breast cancer cells
130198310 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
130198310
NCBI-ProteinID:
XP_056277426
LinkDB
All DBs
Position
8:complement(14294947..14305189)
Genome browser
AA seq
711 aa
AA seq
DB search
MRLKEDMNPLLLQVFRSVVWVYSVITFIPWYFFSGAGDNLERARRIKATSVCGNPAGPYR
AVNSQEKLSAWLQPKVDTLDKMFEYAASRFPKRDCLGTREVLSEEDELQPNGKVFKKVIL
GNYNWLSYEETYEAARCFGSGLAALGQKPQCNIAIFCETRAEWIVAAQACFMYNFPLVTL
YSTLGPTAIAHGLNETEITHIITSKELLQSRLKAIVCDVPRLQYIILVDNKPASWPNIPR
GIMVYSMDAVKEMGSKPENVAVDRRQPENSDLAVIMYTSGSTGIPKGVMISHGNIIAGIT
GMAERLPNLNETDTYIGYLPLAHVLELSAELVCISHGCRIGYSSPQTLSDQSTKIKKGSK
GDTSLLKPTLMAAVPEIMDRIYKNVMTKVEEMSKLEKALFVLAYNYKMEQISKGYSTPLC
DSLVFKRVRALLGGNMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGTISEI
WDYSTGRVGAPLVCSEIRLKDWEEGGYYSTNKPNPRGEIVIGGPNVTMGYYKNETKNRED
FFVDERGQRWFCTGDIGEFHADGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCSLIDN
ICAYANSDQSYVISFVVPNHKQLMVLAEQMQVRGTWEEMCNNSQMEKEVLRIITEAAISA
QMERFEIPKKIRLSAEAWTPETGLVTDAFKLKRKELKTHYQDDIERMYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaaggaggacatgaaccccctgctgctgcaggtcttccgctccgtcgtctgg
gtctactcggtcatcaccttcataccctggtacttcttctccggggcgggcgacaacttg
gaacgggcccgccggatcaaggcgacctcagtttgtggcaacccagccgggccgtacagg
gccgtcaacagccaagagaagctgtcggcgtggctgcagccgaaggtggacaccctggac
aagatgtttgaatacgctgcgagtcggtttccaaagagagactgtctgggcaccagggag
gtgctcagtgaggaggatgagctccagcccaacggcaaggtcttcaaaaaggtaatactc
gggaactataactggctgtcctacgaggagacctacgaggcggcgaggtgttttggcagc
ggcctggcagcgctcggccagaagccccagtgtaacatcgccatcttctgtgagaccaga
gcagagtggatcgtggcggcacaagcctgcttcatgtacaatttcccacttgtgaccctg
tactccaccctcggacccacggccatcgcgcacggcctgaacgagacggagatcacgcac
atcatcacaagcaaagagctgcttcagagccgtctcaaggccatagtgtgcgatgttccg
aggctgcagtacatcattctagtcgacaacaaacccgcaagctggccaaacattcccagg
ggcatcatggtctacagcatggatgcggtgaaggagatgggatccaagcctgaaaacgta
gctgttgaccgcagacagccagagaactcagacctcgcggtcatcatgtacaccagcggc
tccacaggcattcccaagggtgtcatgatctcccatggcaacatcatcgctggcatcact
ggcatggctgagcgactcccgaacctcaatgaaacggacacgtatatcggctacctgccg
ctggcccacgttttggagctcagcgctgaacttgtgtgcatctctcacggctgtcgcatc
ggctactcctcccctcagactctatctgaccagtctaccaagataaagaagggcagtaaa
ggggacaccagtctcctgaaaccgactctcatggctgctgtaccagagatcatggatcgg
atctacaagaatgtgatgaccaaagtcgaggagatgagcaaactcgagaaggcgctcttt
gtgctggcctacaactacaagatggagcagatctccaagggctacagcacacctctctgc
gacagtctggtgtttaaacgcgtgcgtgcactcctgggagggaacatgcgggttctgctt
tctggcggcgctccactctcagccgccacacagcgcttcatgaacatctgcctgtgctgc
ccggtggggcagggctacggcctgacggagacctgtggagccggcaccatcagcgagatt
tgggactacagcacaggacgggttggtgctccactggtttgctcagagatccgactgaag
gactgggaggagggtggttactacagcaccaacaagcccaacccacggggggagattgtg
attggcggtccgaatgtaaccatgggctactacaagaatgaaaccaaaaaccgcgaggac
ttttttgtggatgagcgcggccagaggtggttctgtacaggagacatcggagagttccac
gctgacggatgcctcaagatcatcgaccgtaagaaggacctggtgaaattgcaggcaggc
gagtacgtctctctgggaaaagtggaggctgttttgaagaactgctccctcatagacaac
atctgtgcctacgccaacagcgaccagtcgtacgtgataagcttcgtggtgcccaaccac
aagcagctgatggtgctggcggagcagatgcaggtgaggggcacatgggaggagatgtgc
aacaactcccagatggagaaggaggtcctacgcatcattaccgaggctgctatctcagca
caaatggagcgatttgagatcccgaagaagatccgtctgagtgctgaggcctggacgccg
gagaccgggctggtcactgacgctttcaaactgaagcgcaaggagcttaaaacacactac
caagacgacatcgagaggatgtacggggggaaataa
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