Pseudoliparis swirei (Mariana hadal snailfish): 130198442
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Entry
130198442 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130198442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130198442
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130198442
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
130198442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
130198442
NCBI-ProteinID:
XP_056277577
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All DBs
Position
8:complement(20071379..20122305)
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AA seq
961 aa
AA seq
DB search
MDTAEEGDICRVCRSEATQDKPLYHPCVCTGSIKFIHQECLLQWLKHSRKEYCELCKHRF
TFTPIYSPDMPSRLPVQDIFAGLLTSVATAIRYWFHYTLVAYAWLSVVPLTACRIYKCLF
TGSVSSLLTLPLDMLSTQNLLADSLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQN
PPPLVLNQPNGPAPANDAPGGNVGVDAQGAAAQQPADAAPEGQAPANPNDAGNQGGVAGL
DNEEEDENREEDEEEEDDDDDEDGREEDAVEANNGAHEDFNWNALEWDRAAEELTWERML
GLDGSLVFLEHVFWVMSLNTLFILVFAFCPYHIGHFSVVGLGFEEYVKASHFDGLVTTIL
GYILLAAALIVCHAFASLVKFQRSRRLLGICYIVVKVSLLVVMEIGVFPLICGWWLDICS
LEMFDATLKDRQQSFDSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLN
DPDFNPVQEMIHLPIYRHLRRFILSVVVFGSIVLLMLWLPIRIIKLLFPTFLPYNVMLYS
DAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVHAWTFTAGYMLDLHSYLLGDHEDED
HQPNDNPPGRRHNRIPGLGEGLHAAHQAILQQGGPVGFQSYHRPINFPLKIILLVAFMCV
TLLLASLICLTLPVCAGRWLMSFWMGSAVVHELYTAASGLYICWLSIRGATVMLSWMPQG
WTIIMVKVHEWTLMILKTIVVAVLLAGVIPLLLGLLFELVIVAPLRVQLDQTPLFYPWQD
WALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHFIVRGLAAPVICVLLLSLS
VPYTICKGITPLLGVQPEMQTLVERRIYPFLLMVVMLLSILFFQIRQFKRLYEHIKNDKL
KTSNKSESQSASLKKWTGTDRSGSQAKKGHSVCIQTGDAAVDRGAPSQHRPHAPAPHPGT
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcagaggaaggtgacatctgtcgcgtgtgccggtcagaggccacccaggac
aagccactctaccacccctgcgtctgcaccggcagcatcaagttcatccatcaggaatgc
ttactgcagtggttgaaacacagcagaaaggaatactgtgaattatgcaagcacaggttt
acatttacaccaatctactctccagacatgccgtctcgcttgcctgtccaggacatcttc
gcggggctgctcaccagtgttgcaacagccatcagatactggttccactacacgctggtg
gcctatgcctggttaagtgtggtgcctctcacagcatgtcgtatctacaagtgcttattt
actggctctgtgagctctctccttactctgccattagacatgctttcaacgcaaaacctg
cttgcggactccctccagggctgttttgtagtcacttgcacgctgtgcgccttcatcagc
ctggtgtggctgagggaacagattgtccatggtggcgccccccagtggctggagcagaat
ccaccccctctagttctgaaccagcccaacggtccagcaccggctaacgacgctccaggt
ggcaacgtcggcgtcgacgcacagggtgctgcagctcagcagcctgcagacgccgccccg
gaaggacaggcacccgccaacccaaatgatgccggcaaccaggggggcgtggctggactt
gacaacgaggaggaagatgagaaccgggaggaagatgaggaggaggaggacgacgatgac
gatgaggacggcagggaagaggatgctgtcgaggccaataatggagcacacgaagacttt
aactggaacgccctcgagtgggaccgagccgctgaggagctgacctgggaaaggatgctg
gggctggatggctccctagttttcttggaacatgtcttctgggtgatgtctctcaacaca
ctcttcatcctggtctttgctttctgcccgtatcacattggccatttctccgtggttgga
ctgggctttgaagaatatgtcaaagcgtcacactttgatggccttgtcaccaccatactg
ggttacatcctcctggctgcagctctcatagtctgccatgcgtttgcttcattggtgaag
ttccagcggtccagacgcctcttgggcatctgctacattgttgtgaaggtgtccctgctg
gttgtcatggagataggcgtgtttccgctgatttgtggttggtggctcgacatttgctcg
ctggagatgtttgatgcaactctgaaagacaggcagcagagttttgactcggcacccggc
accaccatgttcctccactggctggttggcatggtctacgtcttctactttgcctccttc
atccttctcctccgagaggtgctccggcctggcgtgctgtggttcttgaggaatctgaac
gaccccgacttcaacccagtccaagagatgatccacctgcccatctacagacacctgcgg
aggttcatactctctgtggtggtgtttggctccatagttctactgatgctctggcttcct
atcagaatcatcaaactgctctttccaaccttcctgccctacaacgtcatgctttacagc
gacgcccccgtaagcgagctatcgctggagctgctgctgcttcaggtcgtcctgccagct
ttgctggagcagggtcacactcgccagtggctgaagggccttgtgcacgcatggacgttc
acagctggatacatgctcgaccttcactcctacctgttgggggaccatgaagacgaggac
caccaaccgaacgacaaccctcccggccgtcgtcacaacaggatccctggattgggggag
gggcttcacgccgcccaccaggccattctgcagcagggcgggcccgtgggcttccagtcg
taccaccggccgattaacttcccccttaagatcattctactggttgcctttatgtgtgtg
acgctgttactggcaagtctgatctgcctcaccctgccggtgtgtgcgggccgctggctg
atgtctttctggatgggcagcgccgtggttcacgagctgtacacggcggccagtggcctg
tacatctgctggctgtccattcgaggcgccaccgtgatgctgtcctggatgccacaggga
tggaccatcatcatggtcaaagtccatgagtggaccctcatgatcctgaaaaccattgtg
gtggccgtgctcttggccggggtgattcctctgctgttgggtctgctgtttgaactggtc
atcgtggctcctctcagagtccaactagaccagacacctctcttctatccctggcaggac
tgggccctgggcgtgctccatgctaaaatcattgctgccatcacactgatgggcccccaa
tggtggctcaaaaccgtcatcgagcaggtgtatgctaacggcatccgaaacattgacctc
cactttatcgtgcgggggctggccgctcccgtcatctgtgtcctactgctgtccctcagt
gtgccctataccatctgtaaaggcatcacgccactgctgggtgtgcagccagagatgcaa
acgctggtggaaaggaggatctatcccttcctgctgatggtggtcatgctgctttccatc
ctgttcttccagatccgacagttcaaacgtctctacgaacacatcaagaacgacaagctc
aaaacgtcaaacaaaagtgaaagccaatctgcttccctcaagaagtggacagggacagac
cgaagtggctctcaagccaagaagggtcactccgtctgcatacaaacaggagatgctgca
gtcgacagaggagcgcctagccaacaccgaccgcatgcgcccgccccgcatcctggaact
gcttga
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