Pseudoliparis swirei (Mariana hadal snailfish): 130198462
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Entry
130198462 CDS
T09868
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03272
Virion - Hepatitis viruses
pswi04382
Cornified envelope formation
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130198462 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130198462 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130198462 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130198462 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130198462 (cldn1)
04147 Exosome [BR:
pswi04147
]
130198462 (cldn1)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130198462 (cldn1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130198462 (cldn1)
Exosomal proteins of colorectal cancer cells
130198462 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
DUF6479
Motif
Other DBs
NCBI-GeneID:
130198462
NCBI-ProteinID:
XP_056277611
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All DBs
Position
8:complement(11110943..11114805)
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFTLAFLGLIGTIASTAMVEWKASSYAGDNIITAQAMYEGLWKSCVSQSTG
QVQCKVYDSLLQLPGMVLGTRGLMICSIMLCLLSILVNMVGMRCTTCMADQPELKDKVAL
AGGVIFIIAGLLALVGTSWYGHRIAQDFYNPFTPTNSKYEFGSALFVGWGAAFLTIIGGS
FLCCNCSSKGSGKSPRHPPSSSAGQPGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcaggtatacagcttctcgggttcacgttggccttcctgggcctcattggc
acgatagcatccacagccatggtggaatggaaagcttcgtcgtacgcaggagacaacatc
atcacagctcaggcaatgtacgaagggctgtggaagagctgtgtgtcacagagcacgggt
caggtgcagtgtaaagtgtatgattcacttctacaactaccagggatggtcctgggcaca
cgtgggctgatgatatgctccatcatgctgtgcttgctttctatattggtgaacatggtg
ggcatgaggtgcaccacctgcatggcggatcaaccggagctgaaggacaaagtggctcta
gccggaggggttatcttcatcatcgctggtctgctcgctctggtgggaacatcttggtat
ggccacagaatagcccaggacttctacaacccattcactccgacgaattctaaatatgaa
ttcggaagtgccttgtttgttggatggggagcggcctttctcaccatcattggagggagc
ttcctctgctgcaactgctcaagcaagggctcagggaaatccccccgccacccaccgtcc
agctctgcaggccagccgggccgggactacgtgtag
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integrated database retrieval system
