Pseudoliparis swirei (Mariana hadal snailfish): 130198510
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Entry
130198510 CDS
T09868
Name
(RefSeq) ras-related protein Rab-8A-like
KO
K07901
Ras-related protein Rab-8A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
pswi04144
Endocytosis
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130198510
04140 Autophagy - animal
130198510
09144 Cellular community - eukaryotes
04530 Tight junction
130198510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130198510
03036 Chromosome and associated proteins [BR:
pswi03036
]
130198510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130198510
04031 GTP-binding proteins [BR:
pswi04031
]
130198510
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
130198510
Autophagy
Other autophagy associated proteins
130198510
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130198510
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130198510
Exosomal proteins of other body fluids (saliva and urine)
130198510
Exosomal proteins of colorectal cancer cells
130198510
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rab Family
Rab8/10/13 [OT]
130198510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
SRPRB
MMR_HSR1
DUF3963
Tor_FN3_2nd
AAA_7
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
130198510
NCBI-ProteinID:
XP_056277661
LinkDB
All DBs
Position
8:7379741..7384354
Genome browser
AA seq
205 aa
AA seq
DB search
MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQ
IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASSDVEKMVLG
NKCDIDKRQVSKDRGENLALEYGIKFMETSAKANINVENAFLTLARDIKSKMDIKLEGNT
AQGGSHGVKISETQKKTSFFRCSLL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacatacgactatctgtttaaattactgttaatcggcgactctggtgtcggg
aagacctgtgtccttttccggttttcagaagatgccttcaactcaacgtttatctcaacg
ataggcattgatttcaagattcggacaatcgagcttgacggcaagaaaataaagttgcag
atatgggatacggccggtcaggagcgcttccgaacaatcacaacggcctactacagagga
gcaatgggcataatgcttgtctacgacatcaccaacgagaagtcttttgaaaatatcaag
aattggattaggaacatcgaggagcatgcatcatcagatgttgagaagatggtccttggc
aacaaatgtgacatcgacaagcggcaggtgtccaaagacaggggagagaatctcgcattg
gagtacggaataaagttcatggagaccagtgcaaaggccaatatcaacgtggagaatgca
tttttaacactcgccagagacatcaaatcaaaaatggacatcaaattggagggcaacacg
gcgcaggggggcagtcacggagtcaagatctccgagactcagaaaaagaccagcttcttc
cgctgcagccttctctga
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integrated database retrieval system
