Pseudoliparis swirei (Mariana hadal snailfish): 130198513
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Entry
130198513 CDS
T09868
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
130198513
NCBI-ProteinID:
XP_056277667
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Position
1:21701044..21723337
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AA seq
751 aa
AA seq
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MSLRTPAKLQQEEDQLGVSTLRMYSSFIPPGLRALSLPEPHFLHAIDYGNYVYFFLSEIA
VEYTALGKVVFSRVARVCKNDDGGSPRVLERHWTSFLKARLNCSLPGDSFFYFDVLRSLS
GVLQVNRRPAVVGVFTTQANSIPGSAVCAFYLDDIEKAFGGRFKAQRGADAAWTPVPEEQ
VPRPRPGACAGDGPAADFRSSVQFPDETLAFIKAHPLMHEAVPAVNQRPCFTRTSSRSKL
TQIAVDASAGPFKDRTVVFLGSDEGRVLKVLASTRPDDGAGSRLLEDIDVYNPSRCDVQG
QQDRRVLGLELDKDHQALFVAFSSCVVRVPLARCRRHGACRGACLASRDPYCIWLRTGSC
ANMAPGIKAGFDQDIEGDHAPAPPPPDGCHDNVLTTTQNQESAADSAYGVRRPLEAERLP
YTLLLACVLLAFLLGAVSSGLLVSCCCGNARRLGRDEEAHAMSLRTLAKLQQEEDQLGVS
TLRMYSSFIPPGLRALSLSQADGELSGLPTPASSPEPASRNTPALNASSSSLHLPEEASH
EGRGGGGAAGGAPPPSALDELLLHLQEVSASGTGGIKVLTCTSSSSMFHGPSAGGGRPPH
YHRGPQRRLPETSSSSSSTPLQVIPETRLLSQRHSLIKMGAVPHHHSFNHQGALARMNTN
SSSNGPPPGPPGPPAERLPDAAAQLQRGASRAAGAGRPQNAVVQTSSFSHSAAPPPRHDG
TGSNGGKIPLRLWEEAEPIEHGQSGKTQRKL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaggacgcccgccaagctgcagcaggaggaggaccagctgggcgtgtccacg
ctgaggatgtacagctccttcatcccccccgggctccgggccctcagcctcccagagcct
cacttccttcacgccatcgactacggtaactacgtctacttcttcctcagtgagatcgca
gtggagtacaccgccctgggcaaggtggtcttctctcgagtcgcccgggtctgtaagaac
gatgacggaggttcacccagagtcctggagagacactggacctccttcctcaaggctcgt
ctcaactgctccctccccggtgactccttcttctacttcgatgtcctccgctctctgagc
ggcgtgctgcaggtcaaccggcggccggcggtggtcggcgtcttcaccacgcaggccaac
agcatccccggctcggccgtgtgcgccttctacctggacgacatcgagaaggcgttcggc
ggccgcttcaaggcgcagcgcggcgccgacgcggcctggacgccggtccccgaggagcag
gtcccccgacccagacccggggcctgtgcgggcgacggtccggcggcagacttcaggtcg
tcggttcaattccctgacgagacgctggcgttcatcaaggcccaccccctgatgcacgag
gccgtccccgccgtcaaccagcggccctgcttcaccaggacctccagcaggtccaagctg
acccagatcgcggtggacgcgtcggccgggcccttcaaggaccggaccgtggtgttcctg
ggctccgacgagggccgggtcctgaaggtcctggccagcacgcgccccgacgacggcgcc
gggtcgcggctgctggaggacatcgacgtctacaacccgtccaggtgcgacgttcagggt
cagcaggacaggagggttctgggtctagagctggacaaggaccaccaggccctgttcgtg
gccttcagcagctgcgtggtccgggtcccgctcgcccgctgccgccgccacggggcctgc
aggggagcctgccttgcctctcgtgacccgtactgcatctggctgcggaccgggagttgt
gccaacatggcgccgggtatcaaggccggcttcgaccaggacatcgagggagaccacgcc
cccgccccgcccccccccgacggctgccacgacaatgtgttgacgacgacacagaaccag
gagtctgcagccgactctgcctacggcgtgcggcgccccctggaggccgagcggctcccc
tacacgctgctgctggcctgcgtgctgctggccttcctgctgggcgccgtctcctccggc
ctcctggtgtcgtgttgctgcggcaacgcgcggcggctcgggagagacgaggaggcgcac
gccatgtcgctgaggacgctcgccaagctgcagcaggaggaggaccagctgggcgtgtcc
acgctgaggatgtacagctccttcatcccccccgggctccgggccctcagcctctcccag
gcggacggcgagctgtccggtctgcccacgccggcctccagcccggagccggccagcagg
aacacgccggccctgaacgcctcgtcctcctcactgcacctccctgaggaggcctcgcat
gaagggcgaggaggaggaggagcagcaggaggagcccctcccccgtcggcgctggacgag
ctgctcctccacctccaggaggtgagcgcgtcggggaccggcggcatcaaggtcctcacc
tgcacctcctcgtcctccatgttccacgggccctcggcaggaggaggacgccccccccac
taccaccgcggcccccagcggcgcctccctgagacctcctcctcctcctcctccactccc
ctccaggtgatcccggagacccgcctcctctcccagcgccactcgctcatcaagatgggc
gccgtgccgcaccaccacagcttcaaccaccagggggcgctggccaggatgaacaccaac
agcagcagcaacggccccccaccgggccccccggggcccccggccgagcgcctgcctgac
gcggcagcacagctacagcgaggcgcctcgcgggcagcgggcgccggtcgtccgcagaac
gccgtcgttcaaacctcaagcttctcccacagcgcggctcctcccccacgccacgacggc
accgggagtaacggcgggaaaataccactgaggctgtgggaggaggcggagccaatcgaa
cacggccagagcggaaagacacaaaggaaactatga
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