KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130198528
Entry
130198528         CDS       T09868                                 
Name
(RefSeq) oxygen-regulated protein 1
  KO
K19538  retinitis pigmentosa 1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pswi03037]
    130198528
   04812 Cytoskeleton proteins [BR:pswi04812]
    130198528
Cilium and associated proteins [BR:pswi03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   130198528
Cytoskeleton proteins [BR:pswi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     130198528
SSDB
Motif
Pfam: DCX
Other DBs
NCBI-GeneID: 130198528
NCBI-ProteinID: XP_056277691
LinkDB
Position
8:complement(6265853..6275642)
AA seq 1953 aa
MSHTPVQEPPAQELSSGSGQTLPSRLLQPISDPSASKRVCFYKSGDYKFSGHRMVINART
FKTFDGLLDALAKKVPLPFGVRTITTPRGTNLVKALDDLHDGGSYVCSDYKRVKPLNLDE
VNRRQVPWNATRPLSGGRRRRKGSQFGPFGRRNEVNTGRPAKITERGAVRTPKRLVVIRN
RDPFVKRTIVLQRRTAPTFDALLDYLSQILQFPVLKLFSMDGRRIDGLAGLILCSGGVVA
TGNEPFRLGNYNFHGESQMAQGMETMEPSMLPPKSQNNKSLSSGRGSRNLSSSSERYIVN
QIKKSTNGSTNSHLHHHSGSLETQVNHRPASLETCGSGRLGDEHHTCVVRQDDDIEKSFR
VNQDGSVTVEMKVRLTIKEEEMLHWTTTLSRSKGIVCASISESGNSSLDSNNGIAKDSSS
ASEDETREEDHPAGPGRSVDFHDQQAYEGYDSMASGKAQNGFKRAPTPGPRHVTKKASVE
SAKTVTESGVQESTLGHYSYRKRTADGEKAEGYCIVRCSSSNKPIPKPRKTASAGASNKG
SHSSARSSGVAEVLQIQNNGMEVTETVMHIYESQDCYDNYLANEEYSADSVPLHGSTSEP
ESKPSTESGPRSPKNDCDIDLSWQPPTTHSQQRQKEEMLSFSSEPVTPLHEITATNSQIQ
DTVKKDKTLKSETKKKMIKPARNKESLNQTSTSEKKQKQSIVSPPKYSKHSSPEKISSNV
SAGKKTLTSSESAKSGQKSRGAEKSQIKKAIEDEKTTRKEQALLNVRITQPKRPNMGKPA
AKDNGQNVNSSAGRPQMKKNLSDILQPKKSLLPGNKRISKPKSMTENRIPTSKKSLELSE
SSMSSRDPSPSEIHQYVESPDQVPYTEEAIAGHSQPPTKVVFKIGGDSESDEKSECQTHP
DEYYLPPASVGPCLEATALLHGDRLERGLCVSMPSVRVDPMQPEDRLRPNQSAEAIGLAE
NGSHPSTSNCLMPRASTTHVLDELYSSIHCITSACEDDRTSNSLPNISTQVASALGSSCK
AFMSFLSVMTLRDNLTGPAPGDDNQSEALLMMESLQKMSAIEDEEELRASLTDLQSRASF
RFREHWNDFQILRERLESEPLSPKFSETEFALDVVSEGRDAFEDIEELMDELNMPQDLRA
EISSTVQQAKLFYPAEESTFVETERNQSDSEDDLEQFVEECNDETKQSLASDTASIAEDI
TQTQQRYDNGEIDPLEKMQSVYSKSENDEEEEEQGEEVRDVGNDREDGLTKETDDDGEER
GEGEEGAVTVMDDTGGKVSVEKEDQEAEEVLMEEVQEEGEDRSVEETDEREGDEKTAEEE
ADEWEKREEEESQGDRVEEGTVEVIEESDDEEEEADEFIGETDGEAQVASEDNNEEEEES
EQEVVEDGEDINIEDEENEGEETDKNMEEEEKCDEAEESRKEPQETINSPEEESAGEKEV
EEIEESIKTGQMLDDKQREDDSENESDELNERLDELEEQESKGEFEEEHASEDADSIAAG
PDCKHRLEEASYLQQQSSCDEAKAKVAEPNTGSPTKYSTECQCEDDKGNGTDTVNEFETD
KGGKPREDGRDILQHPVEISQELLDFVNSALQSSSLIFTYDARGNVRIEPDSARVTQNKQ
FVIPKSGNDTSYVLKRLPSPSTSGLSDYRPETSESGVYKTQESVDIVTDSGEEASPVCGG
KTDIPFNKCGTNVEGTDSKPPDAVITDVLRKNSGGSFSSYDSGTKASKEDLSYFSAASSQ
KADTEPAAEATQCISSPAEKDSADGVLIDHGRWLLKENHLIRKSPPVSQGMYGDLDCTSL
DTGEENNSEDSLSHCNTQHQPLAAISSSELEEMTKPQTPKCTYYNMPHGSDSDPFLDDSS
VKSGKRDASSVRGRGFRVSPTIDTSKTWINKNCSLSSFESVQFKIQERKVHPEGESSAVT
RARRTPGGERGVLQAEDTCDALRVRCSQFCPIL
NT seq 5862 nt   +upstreamnt  +downstreamnt
atgagccacacacccgtccaggagccacctgcccaggaattgtcctcaggcagtgggcag
acattaccctcccgactcctacagccgatctcggatccctccgcttctaaaagagtctgt
ttctacaaaagcggagactataaattcagtggacatcgcatggtcatcaatgcccgcacc
ttcaagacgtttgacggtctactggatgctctggccaagaaagtgcctctgccctttggg
gtcaggaccatcaccacgcctcgcgggaccaacctggtgaaggctttagatgacttgcat
gacggaggctcgtatgtgtgttctgattacaaacgggtgaagccattaaacctggatgag
gtgaaccggcggcaggtaccgtggaatgccaccagacccctcagcggcgggcgccgaaga
cgaaaaggatcccagtttggtccgtttggcagaaggaatgaagtcaacaccgggaggcca
gcaaagatcactgagaggggcgcagtacggacaccaaagaggcttgtggtcatcaggaat
cgggacccctttgttaaacggactattgtgctccagagaagaacagcaccgacatttgac
gctttgttggattacctttcccagatcctgcagttcccagtgctgaaactattttctatg
gatggcagaagaatcgatggtcttgcaggactcatcctgtgctctggaggtgtcgtggcc
acgggcaacgagccattcagattaggaaactacaattttcacggagaaagccaaatggca
caaggaatggagacgatggaaccatctatgttgccgcccaaaagccagaacaacaaatct
ttgtcgagtggaagaggctcacggaatttgtcctcatcatcagagagatacattgtcaac
cagataaaaaagtctacaaatggaagcaccaacagccacctgcatcaccacagcggatca
cttgaaacacaagtcaaccatcgtcccgcatccttggagacgtgtggatccgggaggcta
ggtgatgagcaccatacttgcgttgtacgtcaggacgacgacattgaaaagtctttccgt
gtgaatcaagacggcagcgtgacagtggagatgaaagttcgcctgaccattaaagaggag
gagatgctccactggaccactacgctcagccgcagcaaggggatagtttgtgcctcaatt
tctgagtcgggcaacagctcactcgactcaaacaacggcattgccaaagactcttctagc
gccagtgaggatgagacgagagaggaggaccatcccgctggacctggaaggagtgtggac
tttcacgaccagcaagcatacgagggctacgattccatggcctcgggaaaagctcaaaat
ggtttcaagcgcgcacctacgccaggccctcggcacgtcacgaagaaggcgtctgttgag
agtgcgaagacggtgacagagtcaggggttcaagagagcaccctgggacattattcctac
aggaagaggacggctgatggtgagaaggctgaggggtactgcattgtcagatgcagcagc
agcaacaagccaatccccaaacccaggaaaacggcgtctgcaggagcgagcaacaaaggc
tcccactcatccgccaggtcgtcgggagtagctgaggttcttcagatacagaataacggg
atggaggtgacagaaactgttatgcatatttatgagagtcaagactgctacgacaactat
ttagccaatgaggaatacagcgctgatagtgtcccactgcacggttccacttcagagcca
gaaagcaaaccgtccacggaatcagggccgcgttctcccaaaaatgactgcgatatagat
ttgagctggcagccacccacgactcactcacaacaaagacagaaagaggagatgttgtca
ttctcgtcggagccagtaactccgttgcatgagattactgcaacaaactcccaaatacag
gacacagtaaaaaaagacaaaactcttaaaagtgagacgaagaaaaagatgattaaacca
gctcggaataaggagagtttaaatcagacaagcacctcagagaaaaagcaaaaacaaagc
atagttagccccccaaaatatagcaagcattcctctccagaaaagattagcagcaatgtc
agtgcgggaaaaaagactttaacttcatcggaaagtgctaaaagtggtcaaaagagtcga
ggagcagaaaagtctcaaattaaaaaagcgattgaggatgaaaagacaaccaggaaagag
caagccttattaaatgtgagaattacccaacctaagagaccaaacatgggtaaaccagct
gcgaaagataatggccaaaatgtaaatagttcagctgggaggcctcaaatgaagaagaac
ttgtcagacattctacaacccaagaaatcccttttgcccggcaacaagagaattagcaag
cccaaatccatgactgaaaacagaataccaacatctaaaaagtctttagagttgagtgag
agttcgatgtcttctcgagatccttccccctctgagatccaccaatatgttgagagccca
gaccaagtgccatacactgaggaggccattgcgggtcactcacagcctccaacaaaagtt
gtgttcaagatcggcggtgattctgaatcggatgaaaagagtgaatgccagactcatcca
gacgagtattatctacctcccgcttcagtaggtccttgtcttgaagccacagctttgctg
cacggtgaccgattagagagaggtttgtgcgtttcaatgccgagtgtcagagtcgatccg
atgcaaccggaggacagactgaggccaaaccaatctgcagaggccattggtctggctgaa
aatggatcgcatccatcgacatccaactgtttgatgccgagagcaagtacaacacatgtc
ctggatgaactttattcatccatccactgtatcacgagtgcatgtgaagacgacagaacc
tccaacagccttcctaatatctcaacacaagtggcgtcggcgttgggctcgtcgtgtaaa
gccttcatgtctttcctatcagtgatgactcttcgagacaacctgactggacctgcgccg
ggggacgacaaccaatccgaggccttgctgatgatggaatcgctgcagaaaatgtccgcc
atcgaggacgaggaagagctgagggcaagtttgacggatctgcagagcagagcgtctttt
cgcttcagagaacactggaacgatttccagattctgagagaaaggctcgaaagtgagccg
ctgtctcccaaattttccgaaacagaatttgccctggatgttgtctccgaaggacgggat
gcatttgaggatattgaagagctgatggatgagctgaatatgccgcaagacctcagagca
gagatttcttcaacggtccaacaagcgaaacttttttaccctgcggaggagagcactttt
gtagaaaccgaaagaaaccagtcggactcagaggacgatttggaacaatttgttgaagaa
tgcaacgatgaaacaaaacaatcgctggcgtctgatactgcctccatagctgaagacatt
actcagacacaacagcgttacgataatggagagatagatccattagagaaaatgcaatct
gtgtattccaagtcagaaaatgacgaggaagaagaggaacaaggcgaggaggttagggat
gtgggcaatgacagagaggatggacttacgaaagagacagatgatgatggtgaagaaagg
ggagagggagaagagggggcagtgacagtaatggatgacacgggggggaaagtaagtgta
gagaaggaggaccaagaagcagaggaggtattaatggaagaagttcaagaagaaggagag
gatcgtagtgttgaagaaacagatgagagagagggggatgagaagacagcagaagaggag
gctgatgagtgggaaaagagggaggaggaggagagtcaaggggacagggttgaagaaggg
acagttgaggttattgaggaatccgatgacgaggaagaggaagcagatgagttcattggg
gagacagatggagaggcgcaagtagcaagtgaggacaacaatgaggaagaagaagaaagc
gaacaagaggtggtggaggatggcgaggatataaatattgaagatgaggaaaatgaagga
gaggagactgacaagaatatggaagaggaagaaaagtgtgatgaggctgaggagagcagg
aaagagccgcaggaaacaataaatagtcctgaggaagaatcagcaggagagaaagaagtt
gaggaaattgaagaaagtataaaaacagggcaaatgttagacgacaagcagagggaagat
gattcagaaaatgaaagcgatgagttaaatgagaggttagatgagctggaagagcaagaa
tcaaagggcgagttcgaggaagaacacgcctccgaagatgccgacagtattgccgctggt
ccggactgtaaacaccgactagaggaggcctcgtatttgcagcagcagagcagctgtgat
gaagcgaaggcaaaggtagcagaaccgaacacaggatcaccaaccaaatattccactgag
tgtcagtgtgaggacgataaaggcaacgggacagacacggtgaatgagtttgaaacggac
aagggagggaagcctcgcgaggatggaagagacattctccagcatcctgtggaaatatca
caggaactccttgactttgtgaactccgccctgcagtcctcttcccttatcttcacgtac
gacgctcggggcaacgtcaggattgagccagacagcgcccgggttacgcaaaataaacaa
tttgttattccaaaaagtggaaatgatacgtcctacgttttaaagcgtctcccgagcccc
agcacctcgggtttgtccgattacaggccagaaacgtcggagagcggcgtatataaaact
caggagtctgtagatattgtcacggacagtggagaggaggcttctccagtctgcggagga
aagacggacatccctttcaacaaatgtggaacaaatgtggagggaaccgactccaaaccg
cctgatgcagttattacagacgtcttgcgaaaaaacagtggagggagtttttcttcttat
gactcgggcactaaagcctcaaaggaggatctgtcttatttcagtgctgccagctcccaa
aaggccgacaccgaacctgccgcagaggccacgcagtgcatttcttctcccgcggaaaaa
gactcagctgatggggtattgatcgaccacggtagatggctgctcaaggagaatcacctc
atcagaaaatctcctcccgtctcccagggaatgtacggggatttagattgcacatctcta
gatacgggtgaggagaacaatagcgaggattccctgtctcattgcaatacccagcaccaa
cctcttgcagccatatcctcatcagagctcgaggagatgacgaagccccaaactccaaag
tgcacctactataacatgccacatggaagtgattctgacccctttttagatgattccagt
gtcaaaagtgggaaacgggatgcaagcagtgtcagagggagaggcttcagggtgtcaccc
accattgatacttccaaaacatggataaataaaaattgtagcctgtcttcctttgaatca
gtccagtttaaaatacaagagagaaaagtgcatcctgagggggagtcctcagctgtgaca
cgggcaagaaggactcctggtggagaaaggggtgtactgcaggcagaagacacctgcgat
gcactccgtgtgagatgtagtcaattctgtcccatactataa

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